Pairwise Alignments

Query, 562 a.a., RNA helicase from Cupriavidus basilensis FW507-4G11

Subject, 489 a.a., DEAD/DEAH box helicase from Burkholderia phytofirmans PsJN

 Score =  415 bits (1066), Expect = e-120
 Identities = 241/493 (48%), Positives = 319/493 (64%), Gaps = 24/493 (4%)

Query: 2   SFSELGLSDKLMRAVAEQGYTTPTPIQAQAIPAILKGGDLLAGAQTGTGKTAGFTLPLLQ 61
           +F + GL+  +++AV E GYT PTPIQ QAIP +L G D++  AQTGTGKTA F+LP++Q
Sbjct: 12  TFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVLAGRDMMGAAQTGTGKTASFSLPIIQ 71

Query: 62  -LLSESSAGREPARGQRLPVRALVLTPTRELAAQVEESVRNYGKYLKLRSMVMFGGVGIN 120
            LL ++S    PAR    PVRAL+LTPTRELA QV  +V+ Y K+  LRS V+FGGV +N
Sbjct: 72  RLLPQASTSASPARH---PVRALILTPTRELADQVAANVQAYAKHTALRSAVVFGGVDMN 128

Query: 121 PQIEQLKRGVDIVVATPGRLLDHLSQRTIDLAHVEMLVLDEADRMLDMGFIHDIRKILNV 180
           PQ EQL+RGV+I++ATPGRLLDH+ Q+T +L  V++LVLDEADRMLDMGF+ D+++ILN+
Sbjct: 129 PQSEQLRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPDLQRILNL 188

Query: 181 LPPKRQNLLFSATFSDEIRGLADRLLDNPASIEVARRNTTAETVAQRVYPVDRERKRELL 240
           LP +RQ LLFSATFS EI+ LA   L NP +IEVAR N+TA  V Q VY V    K   +
Sbjct: 189 LPKERQTLLFSATFSGEIKKLAATYLRNPQTIEVARSNSTATNVTQVVYEVAEGDKTGAV 248

Query: 241 AHLVRENDWHQVLVFTRTKHGANRLAEQLDKDGLSALAIHGNKSQSARTRALTEFKAGTL 300
             L+RE    QV+VF  +K GA+RLA  L++DG+ A AIHG+++Q+ R +AL  FK G +
Sbjct: 249 VQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQNERMQALDAFKRGEI 308

Query: 301 RLLVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGAEGEAISLVCVDEISL 360
             LVATD+AARG+DI +LP V+N+DLP   EDYVHRIGRTGRAGA G+A+SL   +E   
Sbjct: 309 EALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLCSPNERKQ 368

Query: 361 MRDIERLIKRQIEQTILPGFEVDPSIPAEPIQKGRQARGQGQGNGGGRGRGQAPAGGQPR 420
           + DIE+LIKR ++   L   E       E     R+   +G+ + G R R  A +G   R
Sbjct: 369 LADIEKLIKRPLDVQRLT-VEAPVRHHHEERAPRRERSSEGREDRGSRRRTGASSGSYDR 427

Query: 421 GR----APAADAGERQQRPARAPQGRGQAPAAADGQGQRRAPQAPGQRPAQGSGRPASA- 475
                  P  D   +   P+ +   + +  AAA       APQ P       S +P +A 
Sbjct: 428 PHHHRAQPVDDFFLKPYEPSPSSVRKIEEAAAA------AAPQKP------ASKQPLAAL 475

Query: 476 --GQGNPRNGQAN 486
             G G PR   ++
Sbjct: 476 LGGFGMPRKSSSS 488