Pairwise Alignments

Query, 1940 a.a., excinuclease ABC subunit A from Cupriavidus basilensis FW507-4G11

Subject, 1949 a.a., excinuclease ABC subunit UvrA from Ralstonia sp. UNC404CL21Col

 Score = 3222 bits (8355), Expect = 0.0
 Identities = 1617/1951 (82%), Positives = 1745/1951 (89%), Gaps = 26/1951 (1%)

Query: 1    MSSGVIRIRGARQHNLKNLDLDLHTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS 60
            MSSGVIR+RGARQHNLKNLDLDL TGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS
Sbjct: 1    MSSGVIRLRGARQHNLKNLDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS 60

Query: 61   AYARQFLDRMDRPQVDRVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAEL 120
            AYARQFLDRMDRPQV+ V+GVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLL+ARAA+L
Sbjct: 61   AYARQFLDRMDRPQVEHVEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFARAAQL 120

Query: 121  FDRQTAQPVRHDSPETIYAELQARAAQGDPRLVVTFPVELPETTTDAEIEQWLSVSGYTR 180
            FDR+TA PVRHD+PETIY EL +R  +GDPRLVVTFPVELP  T+  E+ QWLSVSGYTR
Sbjct: 121  FDRETALPVRHDTPETIYDELLSRTREGDPRLVVTFPVELPANTSPEEVTQWLSVSGYTR 180

Query: 181  VQAQRVVASPTGPRKVLDVVADRFRLGNTEKVRVLEAIEASLKRGSGRVNVYVTDAANEG 240
            VQA+RVV S TG RK+LDVVADRFRL  TE+ R LEAIE+SLKRG GRV+VYV  A +EG
Sbjct: 181  VQAERVVESSTGKRKLLDVVADRFRLQGTERARALEAIESSLKRGGGRVSVYVLPA-DEG 239

Query: 241  AQAQVWRFSTGLHSPESDIRYADPQPALFSFNSAYGACETCRGFGRVIGVDLGLVIPDER 300
            A+  +WRFSTGLH PESD+RYADPQPALFSFNSAYGAC+ CRGFGRVIGVDLGLVIPDER
Sbjct: 240  AEPTIWRFSTGLHCPESDLRYADPQPALFSFNSAYGACDACRGFGRVIGVDLGLVIPDER 299

Query: 301  KTLRGGAIKPMQTPAWKECQDDLMRYAAKAGIPRDVAWSSLTPAERAWVIDGSPDWN-GK 359
            KTLR GAIKPMQTPAWKECQDDLMRYAA A IPR   W+ +T A+R WVI+G P +  G 
Sbjct: 300  KTLRDGAIKPMQTPAWKECQDDLMRYAAAADIPRGTPWAEMTEAQRNWVINGDPAFKRGG 359

Query: 360  WNTHWYGVKRFFDYLESKAYKMHIRVLLSKYRSYTPCETCGGARLKTEALLWRLGSKPGA 419
            WN  WYGV+RFFDYLESKAYKMHIRVLLSKYRSYT CETCGGARLKTE++ WRLG+K  A
Sbjct: 360  WNKQWYGVRRFFDYLESKAYKMHIRVLLSKYRSYTTCETCGGARLKTESMQWRLGTKENA 419

Query: 420  DAVCAPQKRFAPRGVDWDRTQLEALPGLTVHDLMLMPIERIRKFFDELTLPSLMLDDALK 479
            DAV AP+ RF PRGV W R QLEALPGLTVHDLML+PIERIR+FFDELTLPS +LDDALK
Sbjct: 420  DAVLAPEHRFMPRGVAWSRAQLEALPGLTVHDLMLLPIERIRRFFDELTLPSTLLDDALK 479

Query: 480  LLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVKTLFVLDEPSI 539
            LLL EVRTRL YLCDVG+GYLTLDRQSRTLSGGEVQRINLTTALGTSLV TLFVLDEPSI
Sbjct: 480  LLLDEVRTRLAYLCDVGIGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSI 539

Query: 540  GLHPRDLNRIVEAMHRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGNIIFDGTP 599
            GLHPRDL+RIV+AM RLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGNI+FDGTP
Sbjct: 540  GLHPRDLDRIVQAMQRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGNIVFDGTP 599

Query: 600  ADIRGSGTLTGEYLAGHRQVTDLSRWTPRAVDAATPRIVLEGASEHNLRDVTVEIPLQRL 659
            A IR + TLTG YL+G R+V D + W  R V+ ATPR+VLEGASEHNLRDVTVEIPLQRL
Sbjct: 600  ASIRQADTLTGAYLSGQRRVADATDWQARPVNDATPRLVLEGASEHNLRDVTVEIPLQRL 659

Query: 660  VCVTGVSGSGKSTLLQDVLYPAMARQFGKSTDAPGAFRSLTGAEQVADVVFVDQSPIGKT 719
            VCVTGVSGSGKSTL+QDVL+PA+AR FGK+T++PGAFR+L GA+Q++DVVFVDQSPIGKT
Sbjct: 660  VCVTGVSGSGKSTLIQDVLHPALARHFGKATESPGAFRALRGADQISDVVFVDQSPIGKT 719

Query: 720  ARSNPASYVGAFDEIRKLFAKAPMALQRSYTAGMFSFNSGDGRCPTCGGSGFEHVEMQFL 779
            ARSNPASYVGAFDEIRKLFAKAPMALQR YTAG FSFNSGDGRCPTCGGSGFEHVEMQFL
Sbjct: 720  ARSNPASYVGAFDEIRKLFAKAPMALQRGYTAGTFSFNSGDGRCPTCGGSGFEHVEMQFL 779

Query: 780  SDVYLRCPDCDGRRYRAEILEVKIERALPGQPPRALSVADVLELTVSEAVAYFAGDAAVL 839
            SD+YLRCPDCDG RYRAEILEVK+ R       RALSVADVLELTVSEA + FA DA VL
Sbjct: 780  SDIYLRCPDCDGTRYRAEILEVKLPRG-----GRALSVADVLELTVSEAASVFAEDADVL 834

Query: 840  RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGYLAETAQASNT----RVKP-MPYEC 894
            RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAG+LAE AQA+      RVK  +P   
Sbjct: 835  RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAEAAQAAQAAARKRVKQDVPANA 894

Query: 895  -KLFMFDEPTTGLHFDDIAKLMRAFGKLLDGGHSLIVIEHNLDVVRAADWIIDLGPEGGD 953
             +LFMFDEPTTGLHFDDIAKLMRAFGKLLD GHSLIVIEHNLDVVRAADWIIDLGPEGGD
Sbjct: 895  GRLFMFDEPTTGLHFDDIAKLMRAFGKLLDAGHSLIVIEHNLDVVRAADWIIDLGPEGGD 954

Query: 954  AGGEVLCVGTPEDVKRCAHSHTGKALLQYDRAVGHAFVAQDAGVPLQAALRAARARRA-- 1011
            AGG ++C GTP  VK CA SHTG AL QY+ +VG     +  GVPLQ AL   RA+RA  
Sbjct: 955  AGGLLVCAGTPAQVKDCAASHTGAALKQYEASVGQPEAIE--GVPLQTALAERRAKRAAL 1012

Query: 1012 --IEGEDVVRIVNAHEHNLKALNVDIPHGKFNVITGVSGSGKSTLAFDILFHEGQRRYLE 1069
              ++GE+VVRIV+AHEHNLK LNVDIPHGKFNV+TGVSGSGKSTLAFDILFHEGQRRYLE
Sbjct: 1013 AEVQGENVVRIVHAHEHNLKGLNVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLE 1072

Query: 1070 SLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLMYVKL 1129
            SLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRL+YVKL
Sbjct: 1073 SLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKL 1132

Query: 1130 GIQHCIHDGTPVTSQSPESIAAQLLRDYKGQHVGLLAPLVVSRKGVYTDLAKWAKARGNT 1189
            G+QHCIHDGTPV++QSPE+I AQL+RD++GQH+GLLAPLVV+RKGVYTDLAKWAKARG T
Sbjct: 1133 GVQHCIHDGTPVSAQSPEAIFAQLMRDHRGQHIGLLAPLVVNRKGVYTDLAKWAKARGYT 1192

Query: 1190 HLRVDGEFLPVDPWPRLDRFREHTIELPVGDIIVSADNEAALRALLGQALEAGKGVMHLL 1249
            HLRVDGEFL VDPWPRLDRFREHT+ELPVGDI+VS +NEAALRALL QALE GKG+MH+L
Sbjct: 1193 HLRVDGEFLSVDPWPRLDRFREHTLELPVGDIVVSPENEAALRALLEQALEYGKGIMHVL 1252

Query: 1250 APLDGLQHAMGNGGTARVGSTTVFSTKRACPVCSTSYPELDPRLFSYNSKHGWCTSCVGT 1309
            APLDGLQHAM NGGTA VG+  VFSTKRAC  C TSYPELDPR+FSYNSKHGWC SCVGT
Sbjct: 1253 APLDGLQHAMHNGGTAHVGNVKVFSTKRACSTCGTSYPELDPRMFSYNSKHGWCPSCVGT 1312

Query: 1310 GLTLTREQRAAYDDTVMADDNRGREQTLPSEQQEPDDVADTPCADCGGTRLNPVARAVTF 1369
            GL LTREQRAA+DDTV+  D+RGREQTLPSE+ +P+ + D PC DC GTRLNP ARAVTF
Sbjct: 1313 GLALTREQRAAFDDTVLGGDDRGREQTLPSEEVDPEGMTDLPCPDCHGTRLNPTARAVTF 1372

Query: 1370 DTHPIVAVAQWTVSDTHRWVQGLHLAGREGEIARDVVSEIRSRLQFLEEVGLGYLSLDRA 1429
               PIV +AQWTVS T RWV+GL L GR+ +IARDVV+EI SRL FLEEVGLGYLSLDRA
Sbjct: 1373 ADKPIVDIAQWTVSQTRRWVEGLDLTGRDADIARDVVAEIHSRLSFLEEVGLGYLSLDRA 1432

Query: 1430 APSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLDALRKLGEKGNTLVV 1489
            APSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLDALRKLG+KGNTLVV
Sbjct: 1433 APSLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLDALRKLGDKGNTLVV 1492

Query: 1490 VEHDEDTIRCADHIIDIGPGAGKRGGTLVAQGGVAALSASADSLTGQFLAQPILHPLQPR 1549
            VEHDEDTIR ADHIIDIGPGAGKRGGTLVAQGGVA L+A  DSLTG+FL+QPI HPLQPR
Sbjct: 1493 VEHDEDTIRRADHIIDIGPGAGKRGGTLVAQGGVADLAAQPDSLTGRFLSQPIEHPLQPR 1552

Query: 1550 REVTPAGKNNEAVPERWLTVHNATKHNLRNVTASIPLARLVAITGVSGSGKSTLARDVLM 1609
            R+V       +AVPE+WLTVH A  HNLRNVTA++PL+RLVAITGVSGSGKSTLARDVLM
Sbjct: 1553 RQVIAPHAGKQAVPEQWLTVHGAKLHNLRNVTATMPLSRLVAITGVSGSGKSTLARDVLM 1612

Query: 1610 ANLLDAVGRSVMSSPATRRARKAAGSEAPARSQATARTEPRRKLEVTHNWQGCESITGYE 1669
             NLLDAVGRSV+SSPATRRARKAA +E P         +  RKL+V H+W GC+++TG+E
Sbjct: 1613 TNLLDAVGRSVLSSPATRRARKAAQAETP-------EAKMPRKLDVKHDWHGCDNVTGWE 1665

Query: 1670 SIDRVLEVDQTPIGKTPRSCPATYIGVWDTIRKLFAQTLEAKARGYSASRFSFNTGDGRC 1729
            +IDRVLEVDQTPIGKTPRSCPATYIGVWDTIRKLFA TLEA+ARGY+ASRFSFNTGDGRC
Sbjct: 1666 TIDRVLEVDQTPIGKTPRSCPATYIGVWDTIRKLFADTLEARARGYTASRFSFNTGDGRC 1725

Query: 1730 PACEGQGVRTIGMSFLPDVKVHCDVCHGQRFNPETLAVTWRGKNIGDVLTMEIDEAVEFF 1789
            PACEGQGVRTI MSFLPDVKV CDVCHGQRFN ETLAVTWRGKNIGDVLTMEIDEAVEFF
Sbjct: 1726 PACEGQGVRTIAMSFLPDVKVGCDVCHGQRFNAETLAVTWRGKNIGDVLTMEIDEAVEFF 1785

Query: 1790 SAMSNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDITRRGQQAPH 1849
             AM++IAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDD+TRRGQ+APH
Sbjct: 1786 GAMNSIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQKAPH 1845

Query: 1850 TLYVLDEPTVGLHMADVAKLIRVLHRLADGGHSVVVIEHDLDVIAEADWILDLGPEGGVA 1909
            TLYVLDEPTVGLHMADVAKLIRVLHRLADGGHSV+VIEHDLDVIAEADWILDLGPEGG  
Sbjct: 1846 TLYVLDEPTVGLHMADVAKLIRVLHRLADGGHSVIVIEHDLDVIAEADWILDLGPEGGDE 1905

Query: 1910 GGGIVAATDPEGLVRVRASHTGAALAPVLAR 1940
            GG IVAA  PE L RV ASHTGAAL PVLAR
Sbjct: 1906 GGTIVAACGPEALTRVAASHTGAALVPVLAR 1936