Pairwise Alignments

Query, 716 a.a., TonB-dependent receptor from Cupriavidus basilensis FW507-4G11

Subject, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 2e-18
 Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 29/265 (10%)

Query: 46  APSAPATLREVVITANPLGSELTDLVAPVSTLGGDALAVRQGSTLGDTLDKLPGVSSSYF 105
           A + P+   EVV+TAN +   L+++   V+ L G+ L  +  + L D L++ PGVS +  
Sbjct: 21  AETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTELYDALNQEPGVSVTGG 80

Query: 106 GPNASRPIIRGLDGDRIKVLQNGGTTVD---ASTLSNDHAVPIDPLV-AERIEVVRGPAA 161
                   IRG+ G+RI ++++G  + D   A+ +++ +      L   ++I+VV+G ++
Sbjct: 81  AGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYGRNTFSLSNVKQIQVVKGASS 140

Query: 162 LMYGGNAIGGVVNVIDNRIPKEPIQGVGGAVDASATAGGDSARNASGLLEAGNGQIAI-H 220
            +YG  AIGGVV +I+++ P++ +      VDA+ T  G S R        GN  +A+ H
Sbjct: 141 TLYGSGAIGGVV-IIESKAPEDYLYHRDYYVDAALTYSGISNR------YQGNHALAMRH 193

Query: 221 ADAFARKTSDLRIPGYARSASLRN-SQPLPEGESEAYGRLPNSNAQQSGGSLGGAYTWAD 279
            D  A  T D     Y +    RN +Q L   E + Y                  Y   D
Sbjct: 194 GDGEALLTID-----YWQGEETRNFNQDLYNREVDGYNL-----------GFSHHYWLND 237

Query: 280 GFVGANYSEYHNEYGTPAEDTVRLQ 304
                 + EY ++Y    E T  +Q
Sbjct: 238 ALRLKTHLEYFDDYAKRREGTSSIQ 262



 Score = 46.2 bits (108), Expect = 6e-09
 Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 28/245 (11%)

Query: 416 GDLKLNLGGRIDHTSVKAQANGNDR---FSDASRSFNAGSASAGLLYKLAPAWSLTSNLA 472
           GD  L  G R D  + K      DR   +   +   +  S SA + Y+  P W+   +  
Sbjct: 415 GDWTLAAGLRFD--AQKLSPKNTDRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYN 472

Query: 473 YTERAPTFYELYANGPH---VATGSWEQGDPNANKERATSLDLGVRFKSGPHSAGLSGYY 529
           +  RAP++ + Y    H     T    + +     E + S +LG ++ +G     ++ +Y
Sbjct: 473 HGFRAPSYDKAYGASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFY 532

Query: 530 SRFANYLALTNTGTARDAQGDFLAPGSAGALPVMQYMGVPAT-LYGFEAEGRARVWQKLL 588
           S F N++ +   G          A GS     + QY  +     YG E     R+     
Sbjct: 533 SIFDNFIDVKQVGYDN-------ATGSV----IQQYQNIAGVKTYGAEMSVMHRL----- 576

Query: 589 TGSDTVDLEARADYVRGENRNTGEPLPRLSPLRLGGAVVYGAGPWGARADVTYAARQTRV 648
              D   +E +  YV G++    + +  L+PL     + Y    W A + + +A+  +RV
Sbjct: 577 --DDRWSVENKLGYVDGKD-GENQYVRTLTPLEGSVQLNYQRERWDAYSRLNWASAMSRV 633

Query: 649 PSNDT 653
           P+  T
Sbjct: 634 PTCTT 638