Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 663 a.a., DEAD/DEAH box family ATP-dependent RNA helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (715), Expect = 1e-79
 Identities = 169/463 (36%), Positives = 258/463 (55%), Gaps = 15/463 (3%)

Query: 18  FSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLNR 77
           FS L L+ A L+ L ++G+ + TPIQAA++P+ L G+D + +A+TG+GKTAAF+L LLN+
Sbjct: 28  FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87

Query: 78  LDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGAH 137
           L+  ++  QA+V+ PTRELA QV  EI+ L +  + +K+L + GG+ +  Q  +L  GAH
Sbjct: 88  LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 138 IAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLFS 197
           I VGTPGR+ D + R  L+LD  +T +LDEAD ML MGF DD+ ++    P+  Q +LFS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 198 ATYPEGIAKLSQQFLRKPREVKLEEQHDD-SKIRQRFFEVADSDRLNAVGLLLNHFRPVS 256
           AT P  + ++ ++FLR P  V +   +   +K+ Q+++ V   ++  A+  LL      +
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETEETDA 267

Query: 257 TLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAAR 316
           ++ F  T+     L D L A+GF+A ALHG++ Q  R++ +         +LVATDV AR
Sbjct: 268 SIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVAR 327

Query: 317 GLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGAE 376
           GLD+ ++  V N D+  D E Y+HRIGRTGRA + G A+ L   N++  +  IE+   + 
Sbjct: 328 GLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSS 387

Query: 377 MEWQPLSDLTPASNERLL---------PPMVTLQILGGRKEKMRPGDILGALTGDAGYAK 427
           ME   L      +  RL              +L+      EK++    + A T  A   K
Sbjct: 388 MEEIQLPHRDKVAESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAILLK 447

Query: 428 HQIGK-----INVMDMSTYVAVERSIGREAMRKLNDGTVKGKR 465
            Q GK     +    M   +  E+S  RE      DG    +R
Sbjct: 448 RQQGKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGDRPARR 490



 Score = 38.1 bits (87), Expect = 9e-07
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 399 TLQILGGRKEKMRPGDILGALTGDAGYAKHQIGKINVMDMSTYVAVERSIGREAMRKLND 458
           T Q+  GR + ++  DI+GAL  + G  K  IG I +    T+V + +++  +   KL  
Sbjct: 504 TYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQLPKAMSNDVSSKLRK 563

Query: 459 GTVKGKRV 466
             ++ K V
Sbjct: 564 LRIRQKEV 571