Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

 Score =  475 bits (1223), Expect = e-138
 Identities = 253/457 (55%), Positives = 317/457 (69%), Gaps = 4/457 (0%)

Query: 17  SFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLN 76
           SF+ L L P  LA LE +G+ TMTPIQA SLP  L GQD+I Q KTGSGKTAAF L +L+
Sbjct: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64

Query: 77  RLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGA 136
            L+ +RF VQALVLCPTRELADQV  +IR L RA  NIK+LTLCGG PM PQ  SL HGA
Sbjct: 65  NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124

Query: 137 HIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLF 196
           HI VGTPGRI+DHL +  ++L  LNTLVLDEADRML+MGF + +  + +  P ERQTLLF
Sbjct: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184

Query: 197 SATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADS-DRLNAVGLLLNHFRPV 255
           SATYP  I +++Q   R    +K+E  HD S IRQ F++V  S  R  A+  LL H +P 
Sbjct: 185 SATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQPT 244

Query: 256 STLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAA 315
           S++ FCNTK   +++ D L   GF  + LHG+++QRERDQ LVQFAN+S S+LVATDVAA
Sbjct: 245 SSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAA 304

Query: 316 RGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGA 375
           RGLD+  L+AV N D++ DPEV+VHRIGRTGRA   G A S  S NE  RV  I++ M  
Sbjct: 305 RGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMDI 364

Query: 376 EMEWQPLSDLTPASNER-LLPPMVTLQILGGRKEKMRPGDILGALTGDAGYAKHQIGKIN 434
            +E  P +   PA+  R     MVT+QI GG+K+K+RPGDILGALT D       IGKIN
Sbjct: 365 AIE--PSTLPQPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGKIN 422

Query: 435 VMDMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
           +  M  YVAV + I  +A+ K+ +G +KG++ + R+L
Sbjct: 423 LFPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLL 459