Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 467 a.a., ATP-dependent RNA helicase DbpA (RefSeq) from Shewanella amazonensis SB2B

 Score =  471 bits (1212), Expect = e-137
 Identities = 249/472 (52%), Positives = 320/472 (67%), Gaps = 7/472 (1%)

Query: 1   MTSSPTQSAAPAAAGASFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQA 60
           M++S TQ +       +FS L L    L  L  +GY  MTPIQA SLP  LAG+D+I Q 
Sbjct: 1   MSTSDTQPSL------AFSTLKLKTELLENLSSMGYHEMTPIQAQSLPAILAGEDVIGQG 54

Query: 61  KTGSGKTAAFALALLNRLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLC 120
           KTGSGKTAAF L LLN+LD +RF +Q LVLCPTRELADQV QEIR LAR   N+K+LTLC
Sbjct: 55  KTGSGKTAAFGLGLLNKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLC 114

Query: 121 GGSPMRPQADSLAHGAHIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDI 180
           GG PM PQ  SL HGAHI VGTPGRI+DHLER  L+L  LN LVLDEADRML+MGF   +
Sbjct: 115 GGVPMGPQVGSLEHGAHIIVGTPGRIVDHLERDRLDLSNLNMLVLDEADRMLEMGFQPQL 174

Query: 181 AYVASHCPKERQTLLFSATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSD 240
             + +  P+ERQTLLFSAT+PE I  ++QQ +  P  VK+   H+ S I Q F+ + D  
Sbjct: 175 DAIIARSPRERQTLLFSATFPEQIQTIAQQVMYNPVMVKVATTHEKSTIAQHFYHLEDDG 234

Query: 241 -RLNAVGLLLNHFRPVSTLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQ 299
            R+ A+ LLL   +P S + FCNTK   + + D L A GF  LALHG+L+QR+RD+ L+Q
Sbjct: 235 ARMQALQLLLLEHKPESAVVFCNTKRETQKVADDLTAAGFSVLALHGDLEQRDRDETLLQ 294

Query: 300 FANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLAS 359
           FAN+S  VLVATDVAARGLDI  L+AV N  V  D EV++HRIGRTGRA   G A +  +
Sbjct: 295 FANKSACVLVATDVAARGLDIDALDAVFNYHVAHDTEVHIHRIGRTGRAGSKGAAYTFFN 354

Query: 360 MNEMGRVGNIEQAMGAEMEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGAL 419
             +  ++  +E+ +  +++ +PL   +   +  L P M+TLQI GG+K+K+RPGDILGAL
Sbjct: 355 DKDGYKIALLEEYLERDIQSEPLPSASLLGSMPLAPAMITLQIDGGKKDKLRPGDILGAL 414

Query: 420 TGDAGYAKHQIGKINVMDMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
           TGD G    Q+GKI V D   YVAV+R + ++A+ K+  G +KGK  +  ++
Sbjct: 415 TGDKGIEGAQVGKILVTDYRAYVAVDRKVAKKALGKITSGRIKGKSYRAWLM 466