Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 468 a.a., ATP-dependent RNA helicase DbpA (RefSeq) from Shewanella loihica PV-4

 Score =  473 bits (1218), Expect = e-138
 Identities = 250/460 (54%), Positives = 323/460 (70%), Gaps = 2/460 (0%)

Query: 6   TQSAAPAAAGASFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSG 65
           +QS A   +GA F  LPL+PA L TL+ +G+  MTPIQA SLP  L GQD+I Q KTGSG
Sbjct: 2   SQSDATTPSGA-FDSLPLNPALLDTLKSIGFHQMTPIQAQSLPAILNGQDVIGQGKTGSG 60

Query: 66  KTAAFALALLNRLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPM 125
           KTAAF L LLN+LD +RF +Q LVLCPTRELADQV  E+R LAR   NIKILTLCGG PM
Sbjct: 61  KTAAFGLGLLNKLDVKRFRIQTLVLCPTRELADQVAAELRTLARGIHNIKILTLCGGVPM 120

Query: 126 RPQADSLAHGAHIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVAS 185
            PQ  SL HGAHI VGTPGRI+DHL+RG L+LD ++TLVLDEADRML+MGF  ++  +  
Sbjct: 121 GPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLDNVDTLVLDEADRMLEMGFQRELDAIMQ 180

Query: 186 HCPKERQTLLFSATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVA-DSDRLNA 244
             P+ERQTLLFSAT+PE I  LS+QF+  P  VK+E QH    I Q F+E   ++DR+ A
Sbjct: 181 EVPRERQTLLFSATFPEQIQGLSEQFMIDPLMVKVEVQHGGESIEQHFYECGNNNDRMKA 240

Query: 245 VGLLLNHFRPVSTLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRS 304
           + LLL   +P S + FCNTK   +D+   L   GF  +ALHG+L+QR+RDQ+L++FAN+S
Sbjct: 241 LQLLLLKHQPESAVVFCNTKRETKDVAAKLTNAGFSVVALHGDLEQRDRDQMLLKFANKS 300

Query: 305 CSVLVATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMG 364
            SV+VATDVAARGLDI  L+ V+N  +  D EV++HRIGRTGRA   G A +L +  +  
Sbjct: 301 ASVMVATDVAARGLDIDALDMVVNYHMAYDTEVHIHRIGRTGRAGSKGAAHTLFNHEDGY 360

Query: 365 RVGNIEQAMGAEMEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGALTGDAG 424
           ++  +  A+G E++ + L            P MVT+QI GG+K+K+RPGDILG LTGD G
Sbjct: 361 KLSLLADALGREIDGEALPGEALLDTMPPQPRMVTIQIDGGKKQKVRPGDILGCLTGDNG 420

Query: 425 YAKHQIGKINVMDMSTYVAVERSIGREAMRKLNDGTVKGK 464
               ++GKI + +  +YVAV+R + R+A+ K+  G +KGK
Sbjct: 421 IEGSEVGKIKITEFRSYVAVDRKVLRKALNKIVKGKLKGK 460