Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 532 a.a., ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  313 bits (802), Expect = 9e-90
 Identities = 170/377 (45%), Positives = 243/377 (64%), Gaps = 1/377 (0%)

Query: 17  SFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLN 76
           SF  LPL    L  +E+LG+   +PIQ+ ++P  L G+D+I QA+TG+GKTAAF L LL 
Sbjct: 6   SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65

Query: 77  RLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGA 136
           R+DA    VQALVLCPTRELA QV   +  LA+    ++IL++ GG P+ PQA +L  GA
Sbjct: 66  RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASALRRGA 125

Query: 137 HIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLF 196
            + VGTPGRI+DH+ RGTL L  +   VLDEAD MLDMGF +DI  + S  P+  Q+  F
Sbjct: 126 QVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLDMGFREDIERILSEMPEWVQSAFF 185

Query: 197 SATYPEGIAKLSQQFLRKPREVKL-EEQHDDSKIRQRFFEVADSDRLNAVGLLLNHFRPV 255
           SAT P+GI +L+++FLR+P  +++   Q   +   Q +FEV    R++AV  + + + P 
Sbjct: 186 SATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIFDAYIPR 245

Query: 256 STLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAA 315
             + F  TK    +L   L+ +G  A ALHG+L+Q +R++V+ +F     SVLVATDVAA
Sbjct: 246 KAIVFRATKQGVDELAAALQQRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAA 305

Query: 316 RGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGA 375
           RGLD+  ++ VIN D+  DPE YVHRIGRTGRA + G A S A+  ++ ++ +I++  G+
Sbjct: 306 RGLDVDDVDTVINFDLPNDPETYVHRIGRTGRAGRTGRAFSFAAGRDVYKLRDIQRVTGS 365

Query: 376 EMEWQPLSDLTPASNER 392
            ++ + +     AS  R
Sbjct: 366 RIDRRAMPTAADASRAR 382