Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 479 a.a., ATP-dependent RNA helicase DbpA (RefSeq) from Shewanella sp. ANA-3

 Score =  462 bits (1188), Expect = e-134
 Identities = 242/456 (53%), Positives = 308/456 (67%), Gaps = 1/456 (0%)

Query: 17  SFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLN 76
           +FS L L P  L  L  +GY  MTPIQA SLP  LAG+D+I Q KTGSGKTAAF L LLN
Sbjct: 23  AFSTLKLKPELLENLTTMGYHEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLN 82

Query: 77  RLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGA 136
           +LD +RF +Q LVLCPTRELADQV QEIR LAR   N+K+LTLCGG PM PQ  SL HGA
Sbjct: 83  KLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGA 142

Query: 137 HIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLF 196
           HI VGTPGRI+DHLER  L+L  LN LVLDEADRML+MGF   +  +    P+ERQTLLF
Sbjct: 143 HIIVGTPGRIVDHLERNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLF 202

Query: 197 SATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSD-RLNAVGLLLNHFRPV 255
           SAT+PE I  +++Q +  P  VK+   H+ S I Q F+ + D   R+ A+ LLL   +P 
Sbjct: 203 SATFPEQIQSIAKQIMYDPVMVKVAVTHEKSTIEQHFYHLDDDKARMQALQLLLLDRKPE 262

Query: 256 STLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAA 315
           S + FCNTK   + + D L   GF  +ALHG+L+QR+RD+ L+QFAN+S  VLVATDVAA
Sbjct: 263 SAVVFCNTKRETQKVADELSDAGFSVIALHGDLEQRDRDETLLQFANKSACVLVATDVAA 322

Query: 316 RGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGA 375
           RGLDI  L+AV N  V  D EV++HRIGRTGRA   G A +     +  ++  +E+ +  
Sbjct: 323 RGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAFTFFDDQDGYKIALLEEYLER 382

Query: 376 EMEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGALTGDAGYAKHQIGKINV 435
           +++ + L  L+        P M+TLQI GG+KEK+RPGDILGALTG+ G    Q+GKI V
Sbjct: 383 DIQSEALPSLSLLGTAPNAPTMITLQIDGGKKEKLRPGDILGALTGENGIEGSQVGKILV 442

Query: 436 MDMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
            D   YVAV R + ++A+ K+  G +KGK  +  ++
Sbjct: 443 TDYRAYVAVNRKVAKKALSKITSGRIKGKSYRAWLM 478