Pairwise Alignments

Query, 297 a.a., hypothetical protein from Caulobacter crescentus NA1000

Subject, 308 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 17/295 (5%)

Query: 5   AFVALALAGISWGLGFPTGKLILRET-DAAHMVLLRFLVAAVAAAPFALR-----RPEVR 58
           A+  L L    W      GK+  +       +   R+++A     PFA       R ++R
Sbjct: 14  AYGLLILPQFLWATNAIVGKIAAQHAIPPVALAFWRWVLAFAFLLPFAWSALVADRAKLR 73

Query: 59  ALFRSPIVLLAGALYGVAF-LVQFEGLAHVSVTVAALLVGAMPALIAVSARV-LGEKVSR 116
           A +  P+VL+ GAL   A+  + +  LA  +     L+  AMP ++A+ ARV LGE+++ 
Sbjct: 74  AHW--PMVLVLGALSAGAYNALMYAALATSTAINVTLVASAMPVVMALLARVWLGERLNG 131

Query: 117 LSWAGVAAATLGAALIAGKPD-----GASSPLGVALSIAALFLFLTWLLVLRRAPPAPNP 171
               G+  + LG  ++  + D       +   G  L + A+  +  + ++LRR P    P
Sbjct: 132 RQGLGIVISALGVVVVVARGDITVLLSLALNRGDLLMLLAMASWSVYSVLLRRHPLGLKP 191

Query: 172 MAIPAVSIIVAALVVLPI-ALIMHGPPKLALSAPAWTAIVAQGVLATLLATAAWQYGAAQ 230
           +++ A  I    LV++PI A    G   L L       +    +   + A   W  G A 
Sbjct: 192 VSLLAGQIGAGVLVLVPIYAWERAGGAVLPLDLTTAWVLPYTAIFPAIFAFYFWNRGVAA 251

Query: 231 VGAASAGVFINIEPLMGAACGVLLFGDHLTAALFAGGLLIIGG-SFAVVMGERQA 284
           VG + AGV+ N+ P++ A   V L G+       AG  LI+GG +F   +  R+A
Sbjct: 252 VGPSIAGVYTNLMPILTALLAVWLLGEEFAWYHMAGLALILGGIAFVTGLPRRRA 306