Pairwise Alignments

Query, 250 a.a., integral membrane protein from Caulobacter crescentus NA1000

Subject, 241 a.a., membrane protein from Azospirillum brasilense Sp245

 Score =  201 bits (511), Expect = 1e-56
 Identities = 116/246 (47%), Positives = 155/246 (63%), Gaps = 13/246 (5%)

Query: 5   NRGYARSIPADRADMSVDAGLRKFMLGVYNKVALGLVVSGALAYATSSVPAVRDLLFVVQ 64
           +R  A +   DRA  + D GLRK ML VYN + LGL V+G +A   +S PA+   +F   
Sbjct: 9   SRWGAGAAGVDRA--AFDEGLRKHMLRVYNFMMLGLGVTGLVALFVASTPALYVPIFT-- 64

Query: 65  GGRLAGVTPLYMVVAFAPLVLMLIAGFAMRNPKPETAGALYWTIVSLIGASLGSVMLRYT 124
                  TPL  VV  APL  +++  F            L+W   +++G S+ S+ L +T
Sbjct: 65  -------TPLKWVVMLAPLAFIMVLSFRFHAMSTTALQGLFWAFCAVMGVSMASIFLVFT 117

Query: 125 GESVAATFFVTATAFGGLSLFGYTTKKDLTGFGSFLMMGVIGLIVASIVSIFLKSPALLF 184
           G SVA  FF+TA  F  +SL+GYTTK DL+  GSFLMMG+IG+++AS+V+IF+ S AL F
Sbjct: 118 GASVARVFFITAAMFAAMSLWGYTTKADLSKMGSFLMMGLIGIVIASLVNIFVGSSALQF 177

Query: 185 AINVLGVLIFSGLIAYDTQRLKMTYYEMGGDRASMAVATNFGALSLYINFINLFQFLLSF 244
           A++V+GV+IF+GL AYDTQR+K  Y E  G  A+  +A   GALSLY+NFINLFQ LL  
Sbjct: 178 AVSVIGVVIFTGLTAYDTQRIKEEYAEGHGHEANTKLAV-MGALSLYLNFINLFQMLLQL 236

Query: 245 FGGNRE 250
             GNRE
Sbjct: 237 M-GNRE 241