Pairwise Alignments

Query, 250 a.a., integral membrane protein from Caulobacter crescentus NA1000

Subject, 248 a.a., Integral membrane protein, interacts with FtsH from Sphingomonas koreensis DSMZ 15582

 Score =  197 bits (500), Expect = 2e-55
 Identities = 112/240 (46%), Positives = 149/240 (62%), Gaps = 12/240 (5%)

Query: 14  ADRADMSVDAGLRKFMLGVYNKVALGLVVSG--ALAYATSSVPAVRDLLFVVQGGRLAGV 71
           A   D + DAGLR +ML VYN +A G+++SG  AL +A     ++   +F   G      
Sbjct: 18  AGTRDAAYDAGLRSYMLSVYNYMASGVLLSGVVALLFAWGGETSMAYSVFANGG------ 71

Query: 72  TPLYMVVAFAPLVLMLIAGFAMRNPKPETAGALYWTIVSLIGASLGSVMLRYTGESVAAT 131
            PL  ++  +PL ++    F        T  AL+W    L+G SL +++LRYTG SVA  
Sbjct: 72  -PLAWLIILSPLAIVFAMSFGQNKMSTGTLQALFWGFAVLMGLSLSTLLLRYTGASVAQA 130

Query: 132 FFVTATAFGGLSLFGYTTKKDLTGFGSFLMMGVIGLIVASIVSIFLKSPALLFAINVLGV 191
           FF TA  F GLSL+GYTTK+DL+G GSFL++G+IGLIVASI++IF +S  L   I+  GV
Sbjct: 131 FFATAAGFAGLSLYGYTTKRDLSGLGSFLIVGLIGLIVASIINIFTQSSTLSLIISFAGV 190

Query: 192 LIFSGLIAYDTQRLKMTY-YEMGGDRASMAVATNFGALSLYINFINLFQFLLSFFGGNRE 250
           LIF+GL AYDTQR+K  Y Y  G D     V     ALSLY++FIN+FQFLLS  G +R+
Sbjct: 191 LIFAGLTAYDTQRIKSMYAYVAGTDMVGKVVI--MSALSLYLDFINMFQFLLSIIGSSRD 248