Pairwise Alignments

Query, 320 a.a., malate dehydrogenase from Caulobacter crescentus NA1000

Subject, 311 a.a., malate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 6e-26
 Identities = 93/297 (31%), Positives = 151/297 (50%), Gaps = 30/297 (10%)

Query: 5   KIALIGA-GMIGGTLAHIAAREEL---GDVILFDIAEGTPQGKALDIAEA-SAVFGKDVA 59
           K+A++GA G IG  LA +  + +L     + L+DIA  TP G A+D++   +AV  K  A
Sbjct: 2   KVAVLGAAGGIGQALA-LLLKTQLPAGSKLSLYDIAPVTP-GVAVDLSHIPTAVEIKGFA 59

Query: 60  LKGANDYADIAGADVCIVTAGVPRKPGMSRDDLLGINLKVMKAVGEGIKAHAPNAFVICI 119
             G +    + GADV +++AGV RKPGM R DL  IN  +++ + E +    P A V  I
Sbjct: 60  --GEDPTPALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGII 117

Query: 120 TNPLDAMV----WALQQFSGLPKEKVIGMAGVLDSARFAYFLAEATGVSVEDIHAWTLGG 175
           TNP++  V      +++     K ++ G+   LD  R   F+AE  G++V D+    +GG
Sbjct: 118 TNPVNTTVAIAAEVMKKAGVYDKNRLFGVT-TLDVIRSETFIAELKGLNVADVKINVIGG 176

Query: 176 HGDDMVPMVRHSTVGGLPLPELVKQGWLSQDKLDAIVERTRKGGGEIV-ALLKTGSAFYA 234
                     HS V  LPL   V+    S +++ ++ +R +  G E+V A    GSA  +
Sbjct: 177 ----------HSGVTILPLLSQVEGVTFSDEEVASLTKRIQNAGTEVVEAKAGGGSATLS 226

Query: 235 PAESAIAMATSY---LKDKKRVLPCATYLTGQYGLNDLYVGVPVVIGAGGAEKIVEF 288
             ++A     S    L+ +  V+ CA Y+ G     + +   PV++G  G EK++ +
Sbjct: 227 MGQAACRFGMSLVRGLQGEANVVECA-YVDGGSEHAEFF-AQPVLLGKNGIEKVLPY 281