Pairwise Alignments

Query, 165 a.a., SSU ribosomal protein S16P from Caulobacter crescentus NA1000

Subject, 184 a.a., 30S ribosomal protein S16 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  117 bits (294), Expect = 8e-32
 Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 29/184 (15%)

Query: 3   KIRLARGGAKKRPYYSIVVADSHSPRDGRFIEKVGTYNPLLKKDDANRVTLKVESIQEWL 62
           +IRL R G K   +YSIV+ADS +PRDG+FIEK+GTYNP     +   V L  ++   W+
Sbjct: 4   RIRLQRHGRKSYAFYSIVIADSRAPRDGKFIEKIGTYNP---NTNPATVDLNFDAALAWV 60

Query: 63  KKGAQPTDRVARFLAAQGLVAWTH----------------------GNNPEKGKPGKKA- 99
            KGAQP+D V   L+ +G+    H                       NN + G    KA 
Sbjct: 61  LKGAQPSDTVRNILSREGVYMKKHLLGGVAKGAFGEAEAEAKFEAWKNNKQSGLAALKAK 120

Query: 100 --QERLAE-RAQREEERKQAEADAKAAAEAEKAAAAEAAAAAAAAPAVEEAPAEEAPAAE 156
             +E+ AE +A+ E E+K  E  AKA AE + A AAE AAA A A    EAPAEEA A E
Sbjct: 121 QDEEKKAEAKARLEAEKKINEVKAKALAEKKAAEAAEKAAAEAPAEEATEAPAEEAAATE 180

Query: 157 APAE 160
           A AE
Sbjct: 181 AAAE 184