Pairwise Alignments

Query, 309 a.a., cation efflux family transporter from Caulobacter crescentus NA1000

Subject, 481 a.a., cation efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  135 bits (341), Expect = 1e-36
 Identities = 96/311 (30%), Positives = 161/311 (51%), Gaps = 26/311 (8%)

Query: 15  QRVAMLSVATAAILIV-VKAIAWQASGSVAILASLSDSALDLVASLITVYAVRYAAEPPD 73
           +R+A LS   AA+L+  +K     A+ S+ IL+  + S LDLVA+++T +AVR A+ P D
Sbjct: 15  KRIAALSSVGAALLLTGLKLGVGFATNSLGILSEAAHSGLDLVAAVVTYWAVRAASRPAD 74

Query: 74  AEHRFGHGKAEAFSSLMQGGLVFASGALVGREAIN-AWLHPQPVEHGLAGVAVMAISIVL 132
           A+H +GHGK E  S+L++  L+  +   + REA++  +     VE  + G+AVM +SIV+
Sbjct: 75  ADHPYGHGKVENLSALVETLLLLLTCGWIVREAVDRLFFEAVHVEPSVWGLAVMGVSIVV 134

Query: 133 TLALITAQTRVVKASGSIAISGDRAHYAADLASNAVALVGVGAA-----------AWLGL 181
            ++      RV +   S A+  D  H++ D+ S+AV + G+ A             +  L
Sbjct: 135 DISRARMLRRVARKHNSQALEADALHFSTDVWSSAVVIAGLLALRAAMFFPQDSFMFAVL 194

Query: 182 PRVDAAAGLIVALWLIWGAVGVFREASHQLMDHELPDADRTKIVALVTADPNVLGVHQLR 241
            R DA A L+V+  +++ ++ + R A   L+D    +       AL    P ++ + +LR
Sbjct: 195 QRADAFAALVVSCIVVFVSLQLGRRAVDVLLDGGAQEQVERAADALKDL-PGIVRIERLR 253

Query: 242 TRASGPYIHIQMHADLAGDISLAEAHAIIVAAENRVLAAFPAADLIIHGDP--------- 292
            R SGP   + +   +   +S   +H +   AE R+ A  P AD+I+H +P         
Sbjct: 254 VRQSGPRTFVDLLLCVPQGMSFEASHTLSEQAERRLQAVLPQADVIVHMEPASPDEVGML 313

Query: 293 ---RGLAEKHG 300
              RG+A  HG
Sbjct: 314 ERIRGVAASHG 324



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 24/118 (20%)

Query: 202 GVFREASHQLMDHE-------LPDADRTKIVALVTADPNVLGV----------HQLRTRA 244
           G+  EASH L +         LP AD   IV +  A P+ +G+          H L   A
Sbjct: 272 GMSFEASHTLSEQAERRLQAVLPQAD--VIVHMEPASPDEVGMLERIRGVAASHGLAVHA 329

Query: 245 SGPYI-----HIQMHADLAGDISLAEAHAIIVAAENRVLAAFPAADLIIHGDPRGLAE 297
               +     H+ +HA++AG+  L  AH  + A E  +      A ++ H +P  + E
Sbjct: 330 VSFMLVDGEQHVDLHAEVAGEERLEVAHERVSAFEADLARTLGKATVVTHIEPVAVRE 387



 Score = 27.3 bits (59), Expect = 7e-04
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 216 LPDADRTKIVA-------LVTADPNVLGVHQLRTRASGPYIHIQMHADLAGDISLAEAHA 268
           LP+A    + A       L+ A+P+V   H +R    G  + +  H  ++ +  ++ AH 
Sbjct: 390 LPEASNEALTAVEGVVHSLLDAEPDVDDCHNMRLHRLGDELSLSFHCRMSPETPVSVAHE 449

Query: 269 IIVAAENRVLAAF-PAADLIIHGDP 292
                E  + A     + + IH +P
Sbjct: 450 AATRLEKSLRARLGDISRVAIHMEP 474