Pairwise Alignments

Query, 481 a.a., glutamate synthase (NADPH) small chain GltD from Caulobacter crescentus NA1000

Subject, 472 a.a., glutamate synthase small subunit family protein, proteobacterial from Pseudomonas stutzeri RCH2

 Score =  417 bits (1072), Expect = e-121
 Identities = 229/475 (48%), Positives = 298/475 (62%), Gaps = 11/475 (2%)

Query: 1   MAERM---LKFTTVARKTPEKRAAAERSGDFHEIYADFIDAKATEQASRCSQCGVPFCQT 57
           M ER+    +F  V RK P+K+   +R  +F EIY  F   +A EQA RC  CG P+C+ 
Sbjct: 1   MTERLNNDFQFIEVGRKDPKKKLLRQRKKEFVEIYEPFKPQQACEQAHRCLGCGNPYCEW 60

Query: 58  HCPLHNNIPDWLRMTAEGRLEEAYALSQATNSMPEVCGRICPQDRLCEGNCVIEQSGHGT 117
            CP+HN IP+WL++ +EG +  A  L+  TN++PEVCGR+CPQDRLCEG C +   G G 
Sbjct: 61  KCPVHNYIPNWLKLVSEGNILAAAELAHQTNTLPEVCGRVCPQDRLCEGACTLND-GFGA 119

Query: 118 VTIGSVERYLTDKAWEMGWVKPLAAGPARGQSVGIVGAGPAGLAAAEKLREAGYDVTVYD 177
           VTIGSVE+Y+ D A+ MGW   ++     G+ V I+GAGPAGL  A+ L   G    V+D
Sbjct: 120 VTIGSVEKYIADTAFAMGWRPDMSKVKPTGKKVAIIGAGPAGLGCADILVRNGVTPVVFD 179

Query: 178 RHDRAGGLLIYGIPGFKLEKDVVERRTQRLADGGVVFKLGFEVGKDATLEDLRAQHDAVL 237
           ++   GGLL +GIP FKLEK V+ RR +     G+ F+L  EVGKD  ++ L A +DAV 
Sbjct: 180 KNPEIGGLLTFGIPEFKLEKTVLSRRREIFGGMGIEFRLNTEVGKDIAIDQLLADYDAVF 239

Query: 238 IAVGVYAARDLTVPGGGSKGVVPALDYLITSNRLSLGDSVPAYDSGELNAEGKDVVVVGG 297
           + +G Y       PG    GV  ALD+LI +   +LG    A D   ++ +GK VVV+GG
Sbjct: 240 MGMGTYTYMKGGFPGEDLPGVYDALDFLIANVNRNLGFEKSAEDF--IDMKGKKVVVLGG 297

Query: 298 GDTAMDCVRTAIRQGAKSVTCLYRRDKANMPGSMREVANAEEEGVTFEWLAAPRALSGEA 357
           GDTAMDC RT+IRQGAKSVTC YRRD ANMPGS REV NA+EEGV F +   P A+ GE 
Sbjct: 298 GDTAMDCNRTSIRQGAKSVTCAYRRDAANMPGSRREVKNAKEEGVKFLFNRQPIAIVGEG 357

Query: 358 EAVTGVRAIRMRLGAPDASGRQSPEEIPGGDFDRPAQLVVKALGFEPENLPEQWSAPDLK 417
           + V GV+ +  RLGAPDA GR+SPE IPG +   PA  VV A GF P   P  + A  ++
Sbjct: 358 K-VEGVKVVETRLGAPDARGRRSPEPIPGSEQVLPADAVVIAFGFRPSPAP-WFEAQGIQ 415

Query: 418 VTRWGTVKADVRNQ---MTNLDGVFAAGDIVRGASLVVWAIKDGRDAADAIHRYL 469
           +   G V A  + +    T+   +FA GD+VRG+ LVV AI +GR AA+ I  YL
Sbjct: 416 IDNQGRVVAPEQGKFKHQTSNPKIFAGGDMVRGSDLVVTAIFEGRQAAEGIMDYL 470