Pairwise Alignments

Query, 481 a.a., glutamate synthase (NADPH) small chain GltD from Caulobacter crescentus NA1000

Subject, 470 a.a., glutamate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  410 bits (1053), Expect = e-119
 Identities = 222/477 (46%), Positives = 298/477 (62%), Gaps = 17/477 (3%)

Query: 1   MAERMLKFTTVARKTPEKRAAAERSGDFHEIYADFIDAKATEQASRCSQCGVPFCQTHCP 60
           M++ + +F  V R  P K+    R  +F EIY  F   +AT QA RC  CG P+C+  CP
Sbjct: 1   MSQNVYQFIDVNRVDPAKKPLHIRKIEFVEIYEPFTKQQATAQADRCLDCGNPYCEWKCP 60

Query: 61  LHNNIPDWLRMTAEGRLEEAYALSQATNSMPEVCGRICPQDRLCEGNCVIEQSGHGTVTI 120
           +HN IP WL++  EGR+ EA  L+  TNS+PEVCGR+CPQDRLCEG+C +  +  G VTI
Sbjct: 61  VHNYIPQWLKLANEGRILEAADLAHQTNSLPEVCGRVCPQDRLCEGSCTLN-ADFGAVTI 119

Query: 121 GSVERYLTDKAWEMGWVKPLAAGPARGQSVGIVGAGPAGLAAAEKLREAGYDVTVYDRHD 180
           G++E+Y+TD A+EMGW   ++      + V I+GAGPAGLAAA+ L   G    V+DR+ 
Sbjct: 120 GNIEKYITDTAFEMGWKPDMSNVVWTDKKVAIIGAGPAGLAAADILVRNGVRPVVFDRYP 179

Query: 181 RAGGLLIYGIPGFKLEKDVVERRTQRLADGGVVFKLGFEVGKDATLEDLRAQHDAVLIAV 240
             GGLL +GIP FKLEK V+E R +  ++ G+ F+L  EVG+D TL+ L  ++DAV + V
Sbjct: 180 EIGGLLTFGIPSFKLEKGVMENRRRIFSEMGIEFRLNVEVGQDITLQQLLDEYDAVFLGV 239

Query: 241 GVYAARDLTVPGGGSKGVVPALDYLI--TSNRLSLGDSVPAYDSGELNAEGKDVVVVGGG 298
           G Y      +    + GV  AL +LI  T   + L +  P  D       GK+VVV+GGG
Sbjct: 240 GTYQYMRAGLANEDAPGVYDALPFLISNTYKVMELNNEAPFIDMA-----GKNVVVLGGG 294

Query: 299 DTAMDCVRTAIRQGAKSVTCLYRRDKANMPGSMREVANAEEEGVTFEWLAAPRALSGEAE 358
           DTAMDCVRT+IRQGA  V C YRRD+ NMPGS REV NA+EEGV F +   P  +   A+
Sbjct: 295 DTAMDCVRTSIRQGASRVICAYRRDEENMPGSRREVKNAKEEGVEFMFNLQPLGIEVNAQ 354

Query: 359 A-VTGVRAIRMRLGAPDASGRQSPEEIPGGDFDRPAQLVVKALGFEPENLPEQWSAP-DL 416
             VTGV+ ++  LG PDA+GR+ PE + G +   PA  V+ A GF+P  +   W  P D+
Sbjct: 355 GQVTGVKVVKTALGEPDAAGRRKPEPVAGSEHVLPADAVIMAFGFQPHKM--AWLEPFDV 412

Query: 417 KVTRWGTVKADVRN----QMTNLDGVFAAGDIVRGASLVVWAIKDGRDAADAIHRYL 469
           ++ +WG +KA  +     Q TN   +FA GD VRG+ LVV AI +GR AA+ I  YL
Sbjct: 413 ELDQWGRIKAPAKQTYQYQTTN-PKIFAGGDAVRGSDLVVTAIDEGRKAAEGILDYL 468