Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000

Subject, 206 a.a., 3'-5' exonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score =  234 bits (597), Expect = 8e-67
 Identities = 123/199 (61%), Positives = 147/199 (73%), Gaps = 2/199 (1%)

Query: 6   HEGDLPDGVFADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYDCPNLK 65
           H GDLP G+    + IA+D+ETMGL   RD LCVVQLS GD  AHVV L+R D   P L 
Sbjct: 10  HRGDLPSGL-TFPQGIAVDTETMGLNPHRDRLCVVQLSGGDNIAHVVHLNR-DLQAPVLA 67

Query: 66  ALLTNPKVLKLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDVTRELL 125
           +LL +P VLK+ HFGRFDIA     LGV+  PVYCTKIASKL RT TD HGLK + ++LL
Sbjct: 68  SLLGDPSVLKIMHFGRFDIASIHHGLGVLCEPVYCTKIASKLCRTNTDSHGLKALCKDLL 127

Query: 126 GVELSKVQQSSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRMALAQHAFDYL 185
           GV+LSK QQ+SDWGA SLS +Q+ YAASDVL+LH L+ +L+ +L REGR  LA+  F +L
Sbjct: 128 GVDLSKHQQTSDWGAESLSPEQLTYAASDVLYLHALKARLDGLLAREGRTTLAEGCFRFL 187

Query: 186 PHRASLDLAGWEEMDIFAH 204
           P RA LDLAGWEE DIF+H
Sbjct: 188 PTRALLDLAGWEEPDIFSH 206