Pairwise Alignments

Query, 205 a.a., ribonuclease D from Caulobacter crescentus NA1000

Subject, 204 a.a., putative 3'-5'-exonuclease from Phaeobacter inhibens DSM 17395

 Score =  251 bits (641), Expect = 6e-72
 Identities = 125/205 (60%), Positives = 155/205 (75%), Gaps = 1/205 (0%)

Query: 1   MANFVHEGDLPDGVFADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYD 60
           MAN +++ DLPDG+     ++AID ETMGL   RD LCVVQLS GDG+AH+V++++   +
Sbjct: 1   MANHLYQNDLPDGLDL-GPVVAIDCETMGLNPHRDRLCVVQLSGGDGNAHMVQIAKGQSE 59

Query: 61  CPNLKALLTNPKVLKLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDV 120
            PNL A+L +P VLKLFHFGRFDIA      G + APVYCTKIAS+L RTYTDRHGL+++
Sbjct: 60  APNLCAMLEDPNVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLVRTYTDRHGLRNL 119

Query: 121 TRELLGVELSKVQQSSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRMALAQH 180
           T+EL+GV++SK QQ SDWGA  LS  Q+ YAASDVLHLH LR  L+  L+RE R  +AQ 
Sbjct: 120 TQELIGVDISKQQQMSDWGAAQLSDAQLDYAASDVLHLHRLRAALDKRLDREDRSEMAQA 179

Query: 181 AFDYLPHRASLDLAGWEEMDIFAHS 205
            FD+LP RA LDLAGW + DIFAHS
Sbjct: 180 CFDFLPMRAKLDLAGWSDTDIFAHS 204