Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase recQ from Caulobacter crescentus NA1000

Subject, 708 a.a., DNA helicase RecQ from Pseudomonas fluorescens SBW25-INTG

 Score =  457 bits (1176), Expect = e-133
 Identities = 254/609 (41%), Positives = 369/609 (60%), Gaps = 21/609 (3%)

Query: 10  LDRARDVLRRTFGHADFRGLQAGVIHELLTGHSAMAVLPTGGGKSLCYQIPSLIRPGLGL 69
           L++A+ VL+  FG+  FRG Q  +I  + +G  A+ ++PTGGGKSLC+Q+P+L+R GL +
Sbjct: 2   LEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAV 61

Query: 70  VISPLIALMADQVQGLRQAGVAAERLDSNISMDERSDIWRRIDAGEVDLLYLSPEGLMQP 129
           V+SPLIALM DQV  L + GVAA  L+S +S +++ D+  RI  GEV +LYL+PE L+QP
Sbjct: 62  VVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQP 121

Query: 130 WMLDRLSRTPLALIAVDEAHCVSQWGHDFRPEYRMLGRLAELFPDAPRLAVTATADARTR 189
            ML  L    +AL A+DEAHCVSQWGHDFR EY  LG+LAELFPD PR+A+TATAD RTR
Sbjct: 122 RMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTR 181

Query: 190 DDIRAELRLQGAAEFVDSFARPELALSAERKRGKGHDRVVELVLERPGRSGVIYAGSRDG 249
           ++I   L LQ A  F+ SF RP +      K  +   +++  + ER   +G++Y  SR  
Sbjct: 182 EEIVERLHLQNAERFLSSFDRPNIFYRIVPKE-QPRKQLLAFLSERRSDAGIVYCLSRKK 240

Query: 250 TEKLAERLNAEGVPALAYHAGLDKAVRARRLEDFLEADAAVMVATIAFGMGVDKPDVRYV 309
            +++A  L  +G PAL YHAGL    R+   + FL  +  +MVATIAFGMG+DK +VR+V
Sbjct: 241 VDEVAAFLCEQGYPALPYHAGLPNETRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV 300

Query: 310 IHADPPAAIEAYWQEVGRAGRDGQPAEGITLYGSADMAWAARRIETREAPDEVKQVQSRK 369
            H D P ++EAY+QE GRAGRDG PA+   +YG  D+    + ++  E  +  K+++  K
Sbjct: 301 AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK 360

Query: 370 LRQFYAMLEGVTCRAAAVRRYFGEEGVGHCGVCDICVSPPTGIDATQAAQKALSAVHRLG 429
           L    ++ E   CR   +  YF E+    CG CD CV      DAT+ A++ LSA++R G
Sbjct: 361 LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVQTWDATEPARQGLSAIYRTG 420

Query: 430 GRLGRGRVIEHLMGKTKDVTPQ--EAQLPTFGIGREFSQPTWRDLFDTLIFEGLLREDPN 487
            R G G +++ L+GK  +        +L  +G+G+  ++  WR LF  ++  GL+  D  
Sbjct: 421 QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDID-I 479

Query: 488 DGRPLIGLGDVEGVRQVYRNERKVALRQ----TTDAPDSGGRAGGGMRKRREGRALTIPA 543
           +G   + L D    R + + E  + LR+     T A  S  +A   +R            
Sbjct: 480 EGYGGLRLND--SCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVR-----------G 526

Query: 544 ENQLLFEALRSWRKEQAQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGKLDR 603
           E +  +EALR+ R++ AQ   VPPYVIF D+TL E+   +P ++A + +  GVG  KL+R
Sbjct: 527 EEREQWEALRTLRRKLAQEHSVPPYVIFPDSTLLEMLREQPTSMAEMARVSGVGARKLER 586

Query: 604 YGEAVLKVV 612
           YG+A L+V+
Sbjct: 587 YGQAFLEVL 595