Pairwise Alignments

Query, 510 a.a., ATP synthase alpha chain from Caulobacter crescentus NA1000

Subject, 513 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score =  581 bits (1497), Expect = e-170
 Identities = 304/519 (58%), Positives = 388/519 (74%), Gaps = 20/519 (3%)

Query: 1   MDIRAAEISAILKSQIANFGEEAAVSDVGQVLSVGDGIARIYGLDNVQAGEMLEFPKAGV 60
           M + + EIS ++K +I  F   +   + G +++V DGI R++GL +V  GEM+E P    
Sbjct: 1   MQLNSTEISDLIKQRIEQFDVVSEARNEGTIVAVSDGIIRVHGLADVMQGEMIELP-GNR 59

Query: 61  KGMALNLERDNVGAVIFGQDQEIKEGDEVRRLGEIVDVPVGRGLLGRVVNPLGEPIDGKG 120
             +ALNLERD+VGAV+ G   ++ EG +V+  G I++VPVGRGLLGRVVN LGEPIDGKG
Sbjct: 60  YAIALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKG 119

Query: 121 PIQYTERRRVDVKAPGIIPRKSVHEPVQTGLKSIDTLIPVGRGQRELIIGDRQTGKTAVA 180
           PI       V+V APG+I RKSV +PVQTG K++D++IP+GRGQRELIIGDRQTGKTA+A
Sbjct: 120 PIDNDGFAPVEVIAPGVIDRKSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTAMA 179

Query: 181 IDTILNQKAVNAGKDESAKLYCVYVAIGQKRSTVAQIVKTLEEHGALEYTTVVVASASEP 240
           ID I+NQ+         + + CVYVA+GQK ST+A +V+ LEEHGAL  T VVVASASE 
Sbjct: 180 IDAIINQR--------DSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVASASEA 231

Query: 241 APLQYLAPFAGCAMGEWFRDNGLHGLIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVF 300
           A LQ+LAP++GC MGE+FRD G   LI+YDDLSKQAVAYRQ+SLLLRRPPGREAYPGDVF
Sbjct: 232 AALQFLAPYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVF 291

Query: 301 YLHSRLLERAAKLNED-----------NGSGSLTALPIIETQANDVSAYIPTNVISITDG 349
           YLHSRLLERA+++NE+             +GSLTALPIIETQA DVSA++PTNVISITDG
Sbjct: 292 YLHSRLLERASRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDG 351

Query: 350 QIFLETDLFYQGIRPAVNVGISVSRVGSSAQIKAMKQVAGPIKGELAQYREMAAFAKFGS 409
           QIFLET+LF  G+RPAVN GISVSRVG +AQ K +K+++G I+  LAQYRE+AAF++F S
Sbjct: 352 QIFLETNLFNSGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFAS 411

Query: 410 DLDASTQKMLARGERLTELLKQPQYAPLSVEEQVCVIYAGTRGYLDGIPTSSVRRFEAEF 469
           DLD +T+  L  GER+TEL+KQ QYAP+SV EQ  VI+A  +G+L GI    V  FEA  
Sbjct: 412 DLDDATRAQLEHGERVTELMKQKQYAPMSVAEQAVVIFAAEKGFLKGIALKKVGDFEAAL 471

Query: 470 LARLHSQHADLLEGIRTKKALDKDLENTLKSALDSFSST 508
           LA ++++HA+L++ I      + ++E  LK+ LD F +T
Sbjct: 472 LAFMNAEHANLMKLINDTGDYNAEIEAELKAGLDKFVAT 510