Pairwise Alignments

Query, 319 a.a., AraC-family transcription regulator FtrA from Caulobacter crescentus NA1000

Subject, 333 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Xanthomonas campestris pv. campestris strain 8004

 Score =  218 bits (556), Expect = 1e-61
 Identities = 124/317 (39%), Positives = 177/317 (55%), Gaps = 4/317 (1%)

Query: 2   PNASPL-VVALAYDGLCTFEYGVAVELFALPRPEMGEGWYRFATAAVEPGDLRGLGGVHV 60
           P+ +P+ VV +A  G+  F   V + +F L   +     +    AA +       G V V
Sbjct: 9   PSPAPISVVVVAPAGISPFHLSVPMMIFDLQPDD--RPLFTLRIAAEDTRVALAGGQVGV 66

Query: 61  VGDGGLELLAGASIIVAPGWRGLDAPVPRPLIEALRAAHAGGARLMSICSGVFVLAATGL 120
             DG L LL  A +++ PGW  LD      L  AL AA   GA ++ +C G + LA  GL
Sbjct: 67  TPDGDLSLLDQAEVLIVPGWADLDRAPSAALRAALVAATQRGAHVVGLCYGAYALAYAGL 126

Query: 121 LDGRRATTHWRYADALRAHHPAIQVQPDVLYVDEGDVLTSAGSAAGIDLGLHLIRRDFGP 180
           LDG+ A+THW          P +++  + LYVDE  ++TSAG+ A +D  ++L+R+  G 
Sbjct: 127 LDGKLASTHWHAEADFHHRFPRVRLDMNALYVDEQRIVTSAGTGAALDCCMYLVRKLCGA 186

Query: 181 EAANTVARRLVVPPHRDGGQAQFVQRPVPVAHEASRLGPILDQMRANLADEHTIKTLAAL 240
             AN +AR +V+P HRDGGQAQ++ +PVP + + + L  +LD MRA+L  +H +  LA  
Sbjct: 187 RQANAIARMMVLPQHRDGGQAQYIDQPVPASPQDAALSRLLDFMRADLQQDHALDALAER 246

Query: 241 AGMSERTFLRRFEAVTGATPARWLLAERLNHARDLLETASTSIDQVARAVGL-GAPALRH 299
             MS R+F RRF   TG T   WL AERL  A+DLLE+ + SI+QVA   G   A + R 
Sbjct: 247 VAMSRRSFTRRFHKATGMTVGEWLGAERLRRAKDLLESTALSIEQVAEQSGYKSAVSFRQ 306

Query: 300 HFRRQFSTTPGAYRARF 316
            F + F T+P  +R RF
Sbjct: 307 RFNQAFQTSPREWRKRF 323