Pairwise Alignments

Query, 122 a.a., transposase from Caulobacter crescentus NA1000

Subject, 252 a.a., ISSod6, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 9e-25
 Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 2/123 (1%)

Query: 1   MAVRGLGCPVRFSLTAGQKGDAPQAAALIEGLP-AKVVMADTAYDADHLRQAIADKGALA 59
           +AV   G P+ F L+ GQK D   A +LIE L     V+AD  YD+D  R+ IA+KG  +
Sbjct: 126 LAVDSGGLPIYFELSEGQKHDITHAPSLIEHLKQVDTVIADKGYDSDAFRELIANKGGKS 185

Query: 60  VIPNNPSRAL-KHPLDAQLYAQRHLVECCFSKLKQFRRVATRFEKTARNYLAVVTLAAIA 118
           VIP    +   +  +D  LY  RHLVE  F ++K +R ++TR++K ARNY ++V+LA + 
Sbjct: 186 VIPRRRYKNTPQERVDWCLYRYRHLVENAFGRIKHYRAISTRYDKLARNYASMVSLAFML 245

Query: 119 LWL 121
           +WL
Sbjct: 246 MWL 248