Pairwise Alignments

Query, 457 a.a., peptidoglycan binding domain/FecR protein from Caulobacter crescentus NA1000

Subject, 545 a.a., peptidoglycan-binding LysM from Marinobacter adhaerens HP15

 Score =  107 bits (266), Expect = 1e-27
 Identities = 119/435 (27%), Positives = 176/435 (40%), Gaps = 27/435 (6%)

Query: 11  LSMIKAAGVSFVVLALAGGASAWAQTPPAEPPVA--YVVKPGDTLIGLGRAYLNRPSDYR 68
           LS++  A  +   L++  G++  +    A P     Y ++PG++   +    L       
Sbjct: 16  LSLLAWAAPAAAELSVTRGSAGHSDVSSANPVPEWIYTLRPGESFSEVANDLLAPNYPAS 75

Query: 69  RVQKANGVQEPRRLRPGSQLNIDPNLLKSTPIAATLSAFTGPVQIETN--GQRTPARVGM 126
           R+ + N +     L     + I    LK  P  A  ++  G VQ+ +   G++TP     
Sbjct: 76  RLLQYNKIGNGAILGASDSVRIPLAWLKRQPQPARATSVAGTVQLISGNTGRKTPLSEDA 135

Query: 127 PLSEGQWIITGPGAFATFELEDASRVTLPSNTRIRIAKLRQVLINNAPQRVFQLEQGKGT 186
            +  G  I++  G  AT EL D S V +  N+R+   +L Q           +L++G+  
Sbjct: 136 LIRVGDEILSASGT-ATIELADGSEVRISPNSRLIFNRLTQYGKAGMVDTRLRLDRGEIH 194

Query: 187 ISATPTPTPGARFEVRTPVSVSAVRGTEFRVGAGADKAQTEVLVGAVGVDAGASASDNAP 246
               P    GARFE+ TP +V+AVRGT F +   A+  + +V  G   VD GA       
Sbjct: 195 TRVKPVMEGGARFEIETPSAVAAVRGTAFSLQTSAEGTRLQVTEG--DVDFGAPGKTRR- 251

Query: 247 IQAGFGVSAS-ADGVGAPVELL-PAPKLGAGGQTQSDALVRFSLEPVKGAASYRVLLARD 304
           I AGFG S S  D  G  +  L PAP L       +      + +  + A  +RV     
Sbjct: 252 IPAGFGASLSTTDNDGLSIRRLPPAPALNPLPPRLTQLPTTMTWQESR-APMHRV----- 305

Query: 305 AGFIDIFAEAT---TQTTSQQYPIVDFGQVANGTYFVRLTAIDPGGLEGFPADYSFDRDL 361
               DIF   T    ++        D GQ+ NG+Y V L A+D  G  G P     + DL
Sbjct: 306 ----DIFESDTGRWVESRKLTGNSFDIGQLDNGSYEVHLAALDTRGTAGMPRVVPLEVDL 361

Query: 362 D--TLDAAPPSDAREGKHRKFLFRWSSAGDGVRNYRFQMFANGDTQTPIVDQPGLTE-PY 418
              T     P D          FRW   GD     R ++  + D +  I       E   
Sbjct: 362 QARTASLVAPEDGGTVNDDMPEFRWQLNGDN-EVARVEIAEDQDFRNLIATSEWAPETAA 420

Query: 419 LTLTDLAPGAYAWRV 433
           L    L PG Y WRV
Sbjct: 421 LPSRPLGPGKYYWRV 435



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 281 DALVRFSLEPVKGAASYRVLLARDAGFIDIFAEATTQTTSQQYPIVDFGQVANGTYFVRL 340
           D+ VR   E V  AA YR+ L+ + GF +I  EAT   T+    +     +    YFVRL
Sbjct: 470 DSQVRVFWEKVDTAAEYRLQLSEEPGFNNIIKEATLPDTTAALRL-----IPGRRYFVRL 524

Query: 341 TAIDPGGLE 349
            A+  G L+
Sbjct: 525 KALSDGPLQ 533