Pairwise Alignments

Query, 179 a.a., ECF-family RNA polymerase sigma factor from Caulobacter crescentus NA1000

Subject, 190 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 1e-38
 Identities = 82/176 (46%), Positives = 112/176 (63%), Gaps = 3/176 (1%)

Query: 5   ETRLKALMLRGLDGDTAAYREGLALLGVRLRAYFMRRMSGAPGDVEDLVQETLLAVHLKR 64
           E RLK L +RGL G+ AAY+  L  L   LRA+  +R+   P +VEDLVQE LLAVH +R
Sbjct: 14  EERLKDLFVRGLSGNNAAYQTFLGELSSYLRAFLRKRLIRLPDEVEDLVQEALLAVHNQR 73

Query: 65  STWDSAQSFTAWAHAVARYKLIDHWRRRKI--RQTLPLEDHVD-FLADDAPDPGVALELD 121
            T+D +Q  +AW  A+ARYKL+D +RRR I  ++   L+D +D F + DA       +L+
Sbjct: 74  HTYDPSQPLSAWVQAIARYKLVDLFRRRAIYEQRNDTLDDGMDLFSSADAEAAEARRDLN 133

Query: 122 RALASLPQRQRMLVSDVKLTGLSLAEAGARAGISEGAAKVALHRALKALAERMRRA 177
           + LA LP   R+ +   KL GLS+ EA   +G+SE A KV +HR LKALA ++R A
Sbjct: 134 KLLADLPDHFRLPIMHTKLEGLSVREAADVSGMSESAIKVGVHRGLKALAAKIRGA 189