Pairwise Alignments

Query, 673 a.a., tetratricopeptide repeat family protein from Caulobacter crescentus NA1000

Subject, 602 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 69/266 (25%), Positives = 105/266 (39%), Gaps = 52/266 (19%)

Query: 164 AERLLRDRLKADAGDVAAIRMLAETGARLGRYADAEALLTRCMELAPNFAAARHNLATML 223
           A  L+   LK D  D A         A LG   +A     + ++L P+FA A +N    L
Sbjct: 73  AASLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGVAL 132

Query: 224 YRQNKNLEALAQIEQLVAK-----DARHPGYANLYAAILARLGEYDRAIAVYGQVLADYP 278
             Q    EA+ Q    +A      DAR     NL  A L++LG +D A+A Y + L+  P
Sbjct: 133 QAQGDLSEAIEQYRLALASNPMLLDAR----LNLGTA-LSKLGHFDDALACYREALSLDP 187

Query: 279 NQPKGWMSYGHALKTVGRQADSVAAYRKALDLAPTLGEVWWSLANL-------------- 324
              +   + G+A K  G    ++A++ +AL L     E   +L +L              
Sbjct: 188 TSAEAHFNVGNAHKARGDHGAAIASFERALSLRANYTEAHINLGSLIGKLGDYAGAEAHY 247

Query: 325 ---KTVRFTPEDLAAMSQALEAEGLSEDDR--------LHLHYA---------LGKAQED 364
                ++  P  L  +  +L A+G  +++         L  HYA         L K  + 
Sbjct: 248 RRAVALKPNPTHLVCLGGSLGAQGRLDEEEGFYRQALALDPHYADAHQNLAWLLLKRGDY 307

Query: 365 AQDWDASFQHYAAGAAIRREQLDYDA 390
            Q W        A  A+R  + DYDA
Sbjct: 308 RQGW--------AEFALRWRKSDYDA 325



 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 36/321 (11%)

Query: 4   TTAQPAASLAAALEHAERLLEVDPVMAAEQA-RAILEVVPRHADTTRVLAAAQRLSGDAE 62
           T    AA LA+ ++ A    +   + AAE   R  L + P H          Q   GD +
Sbjct: 12  TEPSHAAYLASLIDAALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQRGDHD 71

Query: 63  GGLATVAPLAMALPNLPLA-QLELALCLERLGRTAEAARAFDRVSALEPRLSEAWRGLSE 121
              A++   A+ L     A      L    LG   EA   +D+   L+P  ++A      
Sbjct: 72  TA-ASLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNNFGV 130

Query: 122 SLELLGDRQGAERALARQLRASTRDPLLVEAATALAEDRLGEAERLLRDRLKADAGDVAA 181
           +L+  GD      A+ +   A   +P+L++A        LG A                 
Sbjct: 131 ALQAQGD---LSEAIEQYRLALASNPMLLDARL-----NLGTAL---------------- 166

Query: 182 IRMLAETGARLGRYADAEALLTRCMELAPNFAAARHNLATMLYRQNKNLEALAQIEQLVA 241
                   ++LG + DA A     + L P  A A  N+      +  +  A+A  E+ ++
Sbjct: 167 --------SKLGHFDDALACYREALSLDPTSAEAHFNVGNAHKARGDHGAAIASFERALS 218

Query: 242 KDARHPGYANLYAAILARLGEYDRAIAVYGQVLADYPNQPKGWMSYGHALKTVGRQADSV 301
             A +        +++ +LG+Y  A A Y + +A  PN P   +  G +L   GR  +  
Sbjct: 219 LRANYTEAHINLGSLIGKLGDYAGAEAHYRRAVALKPN-PTHLVCLGGSLGAQGRLDEEE 277

Query: 302 AAYRKALDLAPTLGEVWWSLA 322
             YR+AL L P   +   +LA
Sbjct: 278 GFYRQALALDPHYADAHQNLA 298



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 47/217 (21%), Positives = 89/217 (41%), Gaps = 8/217 (3%)

Query: 170 DRLKADAGDVAAIRMLAETGA---RLGRYADAEALLTRCMELAPNFAAARHNLATMLYRQ 226
           DR++ +    A +  L +      + GR   AE+L    + L P    A H    + +++
Sbjct: 8   DRVRTEPSHAAYLASLIDAALEAHQAGRLDAAESLYRETLVLDPAHTGALHYFGVLQFQR 67

Query: 227 NKNLEALAQIEQLVAKDARHPGYANLYAAILARLGEYDRAIAVYGQVLADYPNQPKGWMS 286
             +  A + + + +  D       +    + A LG  D A+  Y Q L   P+      +
Sbjct: 68  GDHDTAASLMSRALKLDRHDAACWSNRGLVAAALGHLDEAMICYDQALQLQPDFADAHNN 127

Query: 287 YGHALKTVGRQADSVAAYRKALDLAPTLGEVWWSLAN-LKTVRFTPEDLAAMSQALEAEG 345
           +G AL+  G  ++++  YR AL   P L +   +L   L  +    + LA   +AL  + 
Sbjct: 128 FGVALQAQGDLSEAIEQYRLALASNPMLLDARLNLGTALSKLGHFDDALACYREALSLDP 187

Query: 346 LSEDDRLHLHYALGKAQEDAQDWDASFQHYAAGAAIR 382
            S +     H+ +G A +   D  A+   +    ++R
Sbjct: 188 TSAE----AHFNVGNAHKARGDHGAAIASFERALSLR 220