Pairwise Alignments

Query, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

Subject, 364 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 6/339 (1%)

Query: 14  AALLLAATLSACGGKTETDAPAPPTPVEAARVAAPDAAGAVTGAGALERRREMALSFRIP 73
           A +  A  L+ CG   +  APAP        + A   A  +T  G +   +   L+FRI 
Sbjct: 18  AVIASALLLAGCGEAPQISAPAPVVKPALTEIVASQRASDLTFNGVVRAAQRADLAFRIS 77

Query: 74  GVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGY-VS 132
           G LT + ++ GD V+ GQL+A++D        +  Q +L+   ++  R K +FEK   +S
Sbjct: 78  GRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAIS 137

Query: 133 RQRIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARVAD 192
           +  +D  T+    A+   + A     +  + +P  GV+ E+  +    V A QV+  + D
Sbjct: 138 KAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQD 197

Query: 193 LTS-PLVLRLPLAARDAARIRVGDPATVKVDEIGETALNGRVTRVGEAADARTGAVLVEI 251
           L    + + +P     +        A +      +  L  R      ++D++T +V++  
Sbjct: 198 LNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQPSSDSQTYSVVLGF 257

Query: 252 ELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVLEANGQRAFVFRVDG-GKARR 310
           E       +  G  A   + V   P    T   +P  A++  N  + FV+ V+   +A +
Sbjct: 258 E-DLKGFRVMPGMSA-KVIPVADKPADENTLITLPLTALVPDNQGKQFVWVVNAQNQAEK 315

Query: 311 TAVGFGGFDGDDALVS-GLPNGAQVITAGAGFVSDGEAV 348
             V  G    D  +++  L  G QVI AG   V +G  V
Sbjct: 316 RYVDIGTTYKDRVVITQHLKPGEQVIIAGVSSVREGMTV 354