Pairwise Alignments

Query, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

Subject, 368 a.a., efflux RND transporter periplasmic adaptor subunit from Pseudomonas fluorescens SBW25-INTG

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 109/374 (29%), Positives = 157/374 (41%), Gaps = 54/374 (14%)

Query: 9   PLPPLAALLLAATLSACGGKTETDAPAP-PTPVEAARVAAPDAAGAVTGA--GALERRRE 65
           PL  +  L L   L+ C  K +T A  P P PV AA+V   +AAG    A  G +  R E
Sbjct: 5   PLRLVTPLALLIVLNGCNSKADTAAEVPQPRPVLAAKV---EAAGTQQSAYTGVVAARTE 61

Query: 66  MALSFRIPGVLTTMKIEAGDSVRAGQLIAAIDPAGVDA-------RQQQTQADLERVRRD 118
             L FR+ G +   K++ G  V  G  +  +D    +        R    QA L + R D
Sbjct: 62  SDLGFRVSGKVIERKVDPGQHVSRGDTLLVLDIGDFELALRSAKNRVNAAQAQLRQRRDD 121

Query: 119 LERDKVLFEKGYVSRQRIDDRTSALKAAQAAYDAAHFD-------RRWANLVSPVSGVVL 171
             R + L   G VSRQ  D   + L+ A+A   AA  D       R ++ L +   G++ 
Sbjct: 122 ENRYQRLASTGAVSRQIFDQSATNLRVAEAELAAAQSDASQIENRRTYSVLKADGDGIIT 181

Query: 172 ERRAQAGEVVGAGQVVARVA-DLTSPLVLRLPLAARDAARIRVGDPATVKVDEIGETALN 230
           + RA  G+VV  GQ+VAR+A D     ++ LP   RD A                  A  
Sbjct: 182 DVRADRGQVVAEGQIVARLAHDGAREAIVNLPENQRDQA------------------AQK 223

Query: 231 GRVTRVGEAADARTGAVLVEIELSAPPST--LRSGQVAH---------ATLNVRAAPGVT 279
                 G A D    A L E+  SA P+T   R+  V H         +T+ VR      
Sbjct: 224 ALAFPFG-APDQAVIATLRELSASADPTTRTYRARYVLHGAVDRFALGSTITVRLQGNGQ 282

Query: 280 TTYARVPAEAVLEANGQRAFVFRVDGG-KARRTAVGFGGFDGDDALV-SGLPNGAQVITA 337
               RVP  A L+ +GQ   V+ +    K     V       ++AL+ SG+  G  ++  
Sbjct: 283 APQTRVPIGA-LQDSGQGTGVWLIGADDKVSFAPVNVASLGQEEALLDSGVTPGQLIVAL 341

Query: 338 GAGFVSDGEAVAVV 351
           GA  +  G+AV ++
Sbjct: 342 GAHLLHSGDAVRLL 355