Pairwise Alignments

Query, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000

Subject, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  118 bits (295), Expect = 3e-31
 Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 31/360 (8%)

Query: 17  LLAAT---LSACGGKTETDAPAPPTPVEA-ARVAAPDAAGAVTGAGALERRREMALSFRI 72
           LLAAT   L++CG     +AP  P P  A  +V        +   G +  R E    FRI
Sbjct: 9   LLAATAMVLASCG----KEAPKAPEPRPALTQVVGAAGQSDMLWVGEVRARYETDQGFRI 64

Query: 73  PGVLTTMKIEAGDSVRAGQLIAAIDP-------AGVDARQQQTQADLERVRRDLERDKVL 125
            G +   K++ G  V+ GQ++A +DP       A  +A+ +  +AD    + + ER K L
Sbjct: 65  GGKVVERKVDIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEYERQKKL 124

Query: 126 FEKGYVSRQRIDDRTSALKAAQAAYDAAHFDRR-------WANLVSPVSGVVLERRAQAG 178
            EK ++S+   D R +  KAA A  D A            + +LV+   GVV + + + G
Sbjct: 125 LEKQFISQSAFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTDVKVEPG 184

Query: 179 EVVGAGQVVARVADLTSPLVLRLPLAARDAARIRVGDPATVKVDEIGETALNGRVTRVGE 238
           +VV AGQ   R+A L     + + +       I  G  A +++    + +   RV  V  
Sbjct: 185 QVVSAGQPAIRLA-LAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAP 243

Query: 239 AADARTGAVLVEIELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVLEANGQR- 297
           AADA T +  V++ +  P + LR G  A   +    AP        VP  A+   +G+  
Sbjct: 244 AADAATRSFQVKVTVLEPDAGLRLGMTAGVLIGSAEAP------LLVPTAALTRQDGKNT 297

Query: 298 AFVFRVDGGKARRTAVGFGGFDGDDALV-SGLPNGAQVITAGAGFVSDGEAVAVVDPTRL 356
            +V     G+ +  +V  G F  D  +V  GL  G +V+ AG   +  G+ V  V+P+ +
Sbjct: 298 VWVVNPQSGEVQPRSVTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVRAVEPSNV 357