Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E3

 Score =  796 bits (2057), Expect = 0.0
 Identities = 404/668 (60%), Positives = 507/668 (75%), Gaps = 12/668 (1%)

Query: 46  KFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALIL 105
           +F+LV+ ++PAGDQP AI  +VEG++ G   Q LLGVTGSGKTF++A VIA+ QRP L+L
Sbjct: 3   EFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTLVL 62

Query: 106 APNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMR 165
           APNKTLAAQLY E K+FFP NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SIN+ I++MR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 166 HSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKR 225
            SAT+A+LER D I+V +VSCIYG+GS ETY  M   ++ G ++D++ L+  L   QY R
Sbjct: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTR 182

Query: 226 NDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKV 285
           ND  F R TFR RGD I+I PA  +  A R+ +F DEVE +S FD LTG+    L     
Sbjct: 183 NDMDFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVEKISAFDPLTGEVIRQLPRFTF 242

Query: 286 YANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSC 345
           Y  SH+VTPR TL  AI  I+ EL+ERLE+L +N KL+EAQRLEQRT FDLEMI   G C
Sbjct: 243 YPKSHYVTPRETLLGAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYC 302

Query: 346 AGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAE 405
            GIENYSRYLSGR++GEPPPT F+Y+P +ALL  DESH +VPQ+GAMYKGDR+RK TL E
Sbjct: 303 NGIENYSRYLSGRESGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 406 YGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPV 465
           YGFRLPSALDNRP++F+EW+++ PQ++ VSATP N+E E AG V  EQ++RPTGL+DP +
Sbjct: 363 YGFRLPSALDNRPMRFDEWESISPQTIFVSATPGNYEAEHAGRVI-EQLVRPTGLVDPQI 421

Query: 466 EVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSD 525
           E+RP      +QVDD++ EI + +    R LVT LTK+M+EDLT+YL + G+RVRY+HSD
Sbjct: 422 EIRP----ALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSD 477

Query: 526 VDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI 585
           +DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTI
Sbjct: 478 IDTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 537

Query: 586 GRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNS 645
           GRAARN++G+ ILYADR+TGSMERA+ ET RRR+KQ A+NL +GITP+ V +D+ DI+  
Sbjct: 538 GRAARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEG 597

Query: 646 PYERGDRVLVPMGMSETDDRPFSGDN-------FKAALKDLEAKMREAAANLEFETAARL 698
               G R     GM++  +     +N           ++ LE KM + A +LEFE AA+ 
Sbjct: 598 ATVPGSRSKKRKGMAKAAEESARYENELRSPSEIAKRIRQLEEKMYQLARDLEFEAAAQT 657

Query: 699 RDEIKRMK 706
           RDEI +M+
Sbjct: 658 RDEITKMR 665