Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 671 a.a., Excinuclease ABC subunit B from Pseudomonas syringae pv. syringae B728a

 Score =  797 bits (2059), Expect = 0.0
 Identities = 403/668 (60%), Positives = 509/668 (76%), Gaps = 12/668 (1%)

Query: 46  KFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALIL 105
           +F+LV+ ++PAGDQP AI +LVEG+  G   Q LLGVTGSGKTF++A VI++ +RP L+L
Sbjct: 3   EFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQIKRPTLVL 62

Query: 106 APNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMR 165
           APNKTLAAQLY E K+FFP NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SIN+ I++MR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 166 HSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKR 225
            SAT+A+LER D I+V +VSCIYG+GS ETY  M   ++ G ++D++ L+  L   QY R
Sbjct: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLRMVMHIDRGDKLDQRALLRRLADLQYTR 182

Query: 226 NDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKV 285
           ND  F R TFR RGD I+I+PA  +  A RV +F DEVE+LS FD LTG+    L     
Sbjct: 183 NDMDFARATFRVRGDVIDIYPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRFTF 242

Query: 286 YANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSC 345
           Y  SH+VTPR TL +A+  I+ EL+ERLE+L +  KL+EAQRLEQRT FDLEM+   G C
Sbjct: 243 YPKSHYVTPRETLIEAMENIKVELQERLEYLRSQNKLVEAQRLEQRTRFDLEMMLELGYC 302

Query: 346 AGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAE 405
            GIENYSRYLSGR +G PPPT F+Y+P +ALL  DESH +VPQ+GAMYKGDR+RK TL E
Sbjct: 303 NGIENYSRYLSGRPSGAPPPTLFDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 406 YGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPV 465
           YGFRLPSALDNRP++F+EW+A+ PQ++ VSATP N+E E AG +  EQV+RPTGL+DP +
Sbjct: 363 YGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRI-VEQVVRPTGLVDPQI 421

Query: 466 EVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSD 525
           E+RP      +QVDD++ EI +      R LVT LTK+M+EDLT+YL++ G+RVRY+HSD
Sbjct: 422 EIRP----ALTQVDDLLSEIHKRAALEERVLVTTLTKRMSEDLTDYLSDHGVRVRYLHSD 477

Query: 526 VDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI 585
           +DT+ER+EIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLRS+ SLIQTI
Sbjct: 478 IDTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTI 537

Query: 586 GRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNS 645
           GRAARN++G+ ILYADR+TGSMERA+ ET RRREKQ A+NLEHGITP+ V +D+ DI+  
Sbjct: 538 GRAARNLNGRAILYADRITGSMERAIGETERRREKQIAFNLEHGITPKGVFKDVADIMEG 597

Query: 646 PYERGDRVLVPMGMSETDDRPFSGDN-------FKAALKDLEAKMREAAANLEFETAARL 698
               G R     GM++  +     +N           ++ LE KM + A +LEFE AA++
Sbjct: 598 ATVPGSRSKKRKGMAKAAEENARYENELRSPSEINKRIRQLEEKMYQLARDLEFEAAAQM 657

Query: 699 RDEIKRMK 706
           RDEI +++
Sbjct: 658 RDEIGKLR 665