Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 686 a.a., excinuclease ABC subunit B from Marinobacter adhaerens HP15

 Score =  766 bits (1979), Expect = 0.0
 Identities = 398/670 (59%), Positives = 498/670 (74%), Gaps = 15/670 (2%)

Query: 47  FKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALILA 106
           F++ S +QPAGDQP AI  L++G+Q+G   Q LLGVTGSGKTFT+A VI + QRP +I+A
Sbjct: 15  FQVDSPFQPAGDQPKAIEGLMDGIQSGLAHQTLLGVTGSGKTFTIANVIQQVQRPTIIMA 74

Query: 107 PNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRH 166
            NKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SINE I++MR 
Sbjct: 75  HNKTLAAQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINEHIEQMRL 134

Query: 167 SATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKRN 226
           SAT+A+LER D I+VA+VS IYG+G  ++Y  M   L+ G ++D++ ++  L   QY RN
Sbjct: 135 SATKALLERPDAIIVATVSSIYGLGDPQSYLKMMLHLDRGDQIDQRYILRRLAELQYTRN 194

Query: 227 DQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKVY 286
           D  F R  +R RGD I++FPA  E  A R+ +F DEVE LS FD LTG+    +  + +Y
Sbjct: 195 DIEFHRANYRVRGDVIDVFPAESEKEAIRIELFDDEVENLSYFDPLTGEVLRRVPRVTIY 254

Query: 287 ANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSCA 346
             SH+VTPR T+  A+  I+ EL ERL+ L  N +L+EAQRLE+RT +D+EM+   G C 
Sbjct: 255 PKSHYVTPRQTVLDAVEHIKVELDERLQQLRDNNRLVEAQRLEERTRYDIEMMLELGYCN 314

Query: 347 GIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAEY 406
           GIENYSRYLSGR+ GE PPT F+Y+P NALL  DESH T+PQIGAMYKGDR+RK TL EY
Sbjct: 315 GIENYSRYLSGRRPGEAPPTLFDYLPPNALLVVDESHVTIPQIGAMYKGDRSRKETLVEY 374

Query: 407 GFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPVE 466
           GFRLPSALDNRP+KFEEW+ + PQ + VSATP+ +E E AG V  EQV+RPTGL+DP +E
Sbjct: 375 GFRLPSALDNRPMKFEEWERIAPQMIFVSATPSTYEAEHAGQV-VEQVVRPTGLLDPEIE 433

Query: 467 VRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSDV 526
           VRP S    +QVDD++ EI   ++   R LVT LTK+MAEDLT++L E  I+VRY+HSD+
Sbjct: 434 VRPAS----TQVDDLLSEIHTRVKVKERVLVTTLTKRMAEDLTDFLMEHDIKVRYLHSDI 489

Query: 527 DTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIG 586
           DT+ER+EIIRDLR G FDVLVGINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT+G
Sbjct: 490 DTVERVEIIRDLRRGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTMG 549

Query: 587 RAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDILNSP 646
           RAARNV GK ILY DR+TGSM+RA+ ET RRR KQ A+NLE GITP+ + + I DI+   
Sbjct: 550 RAARNVHGKAILYGDRITGSMQRAIDETERRRAKQEAHNLEQGITPQGLNKKIADIMEGA 609

Query: 647 --YERGDRVLVPMGMSETDD----RPFSGDNF-KAALKD---LEAKMREAAANLEFETAA 696
               RG R     G    ++    R  +G+   +  LK+   LE +M +AA+ L+FETAA
Sbjct: 610 GGGGRGRRKAERPGQKAAEEAEQYRAKAGNRSPEEVLKEVSRLEDEMYKAASELDFETAA 669

Query: 697 RLRDEIKRMK 706
           RLRD+I  +K
Sbjct: 670 RLRDDIAELK 679