Pairwise Alignments

Query, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000

Subject, 697 a.a., excinuclease ABC subunit B from Burkholderia phytofirmans PsJN

 Score =  767 bits (1980), Expect = 0.0
 Identities = 394/664 (59%), Positives = 490/664 (73%), Gaps = 6/664 (0%)

Query: 44  GKKFKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPAL 103
           G  F+L   Y PAGDQPTAI  LVEG+++G   Q LLGVTGSGKTFTMA  IAR  RPA+
Sbjct: 23  GSPFQLYQPYPPAGDQPTAIDTLVEGVEDGLSFQTLLGVTGSGKTFTMANTIARLGRPAI 82

Query: 104 ILAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDR 163
           + APNKTLAAQLYSE + FFP NAVEYFVSYYDYYQPEAYVP+ D +IEKDSSINE I++
Sbjct: 83  VFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQ 142

Query: 164 MRHSATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQY 223
           MR SAT++++ER DV++VA+VS IYGIG+   Y  M  TL  G ++ ++ +IA L+A QY
Sbjct: 143 MRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHKMILTLRTGDKLGQRDIIARLIAMQY 202

Query: 224 KRNDQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMI 283
            RN+  F+RG+FR RGDTI+IFPA + + A RV +F DE+E L  FD LTG+    +   
Sbjct: 203 NRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDDEIETLQLFDPLTGRVRQKIPRF 262

Query: 284 KVYANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTG 343
            VY +SH+VTPR T+ +A+  I+ EL+ERLE+  + GKL+EAQRLEQRT FDLEM++  G
Sbjct: 263 TVYPSSHYVTPRDTVVRAVETIKAELRERLEFFYSGGKLVEAQRLEQRTRFDLEMLQELG 322

Query: 344 SCAGIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTL 403
            C GIENYSR+ SG   GEPPPT  +Y+P +AL+  DESH  + Q+  MY GDR RK  L
Sbjct: 323 FCKGIENYSRHFSGAAPGEPPPTLVDYLPSDALMLLDESHVLIGQLNGMYNGDRARKENL 382

Query: 404 AEYGFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDP 463
            +YGFRLPSALDNRPLKF E++    Q V VSATPA++E + AG V AEQ++RPTGL+DP
Sbjct: 383 VDYGFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYEQKTAGQV-AEQLVRPTGLVDP 441

Query: 464 PVEVRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMH 523
            +EVRP      SQVDDV+ EI + ++ G R LVTVLTK+MAE LTE+L + G++VRY+H
Sbjct: 442 EIEVRP----ARSQVDDVLGEINERVKAGDRVLVTVLTKRMAEQLTEFLADHGVKVRYLH 497

Query: 524 SDVDTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQ 583
           SD+DT+ER+EIIRDLRLG FDVLVGINLLREGLDIPE  LVAILDADKEGFLR+E SLIQ
Sbjct: 498 SDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQ 557

Query: 584 TIGRAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDIL 643
           TIGRAARNV+GK ILY D++T SM RA+ ET RRR KQ A+NL +GITP  V + I+DI+
Sbjct: 558 TIGRAARNVNGKAILYGDKITDSMRRAIDETERRRNKQIAFNLANGITPRGVVKRIRDII 617

Query: 644 NSPYERGD-RVLVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEI 702
           +  Y   D R  +    +       S       LK LE +M E A NLEFE AA+ RD++
Sbjct: 618 DGVYNVDDARAELKEQQARAKFEDMSEKQLAKELKRLEKQMMEHAKNLEFEKAAQTRDQL 677

Query: 703 KRMK 706
             ++
Sbjct: 678 ALLR 681