Pairwise Alignments

Query, 424 a.a., flagellar hook-associated protein FlgL from Caulobacter crescentus NA1000

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 89/420 (21%), Positives = 160/420 (38%), Gaps = 66/420 (15%)

Query: 7   SLNALRGAAALSEADARLSSAGNRVSTGRRIDSPRDNGATWSISRRMATEARSFQVVNDS 66
           +++A+     L++A   L+++  R+S+G RI+S +D+ A   IS R+  ++R   V   +
Sbjct: 8   NVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVAMRN 67

Query: 67  LARGASMLDVAAAGVEQIHDFLATAREKALALRDPSLDEPSKLALVADVKMLVDQVNRVA 126
              G S+   A   + +    L   R+ AL   + +     + AL  +   L D++NR+A
Sbjct: 68  ANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELNRIA 127

Query: 127 MQAVFDGKRPLADKLTTGSVTYSQTTYNPVTTAATPA-----SLGGAFVNASGVAAQTFL 181
               F G++ L       S     ++   +    T        +GG     S +A Q   
Sbjct: 128 ETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGG----QSFIAEQPKT 183

Query: 182 RDGGATPGRIDL---YLDAYGVPDVLEIWQGGARRAATGQGFVGGGAPVAAGTAVSGRSI 238
           ++ G  P   DL   +    G   VL+I             ++ G   +   +      +
Sbjct: 184 KEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQEGKL 243

Query: 239 LSFDYNPASGHDIEFRFNEAGSLAGTAWAVDAIALQPLASARPTTNTTSFTVPDVTTSSA 298
             F   P    +IE  FN +G L          A +   +  P   T   TV D+  +S 
Sbjct: 244 QIFVAEP----NIEGNFNISGGL----------ATELGLNGGPGVKT---TVQDIDITSV 286

Query: 299 TGYDFTSDPNGGSELVTSQPLTAEALDLDTIDWTNVGGIFESVEQALNKTRAAGIYFGGR 358
                     GGS+                    N  GI ++  + ++  RA     G +
Sbjct: 287 ----------GGSQ--------------------NAVGIIDAALKYVDSQRAD---LGAK 313

Query: 359 QESFAGLIAQNRLMSDTLATGVGNLVDADLARESARL---QAL-EASASLASQALSIANS 414
           Q   +  I+    + + +      + D D A+E+ +L   Q L +A  S+ +QA  + NS
Sbjct: 314 QNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPNS 373