Pairwise Alignments

Query, 445 a.a., two-component sensor histidine kinase from Caulobacter crescentus NA1000

Subject, 468 a.a., Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  333 bits (855), Expect = 5e-96
 Identities = 193/450 (42%), Positives = 266/450 (59%), Gaps = 10/450 (2%)

Query: 3   LTRLDIP------PALKRLLPTTLFGRSLLIIILPVAIMQIAVTWAFFDAHWQSVTSKLS 56
           + RLD P       A+K +LP +L GRSLLII++P+ ++Q+     FFD HW +++ +L+
Sbjct: 20  ILRLDHPLLRPFARAIKMILPKSLLGRSLLIIVIPLILLQVITATIFFDRHWDTMSRRLN 79

Query: 57  EGLAGDIAWAVQSYEDDPSPAAVEKLAERAEGALSLSIAFQKGRKLP-TSHRPSLFAALD 115
             +  +I   +      P P   E +   A G   L++ F+    LP TS        + 
Sbjct: 80  AAVGSEIGMVLDFMAAYPDPEEREWMFALAYGRQQLAMRFEPEATLPGTSPLAQDDDFVA 139

Query: 116 RSLDKALEDRLDNPFWFDTTRYRAYIDIRVQVDGGVLQIYALRDRAYATQGHIFILWMVV 175
           R+L  +L +  D P+  D    +  ++IR+    G+L +   R R ++   +IFI WM V
Sbjct: 140 RTLYSSLAEHTDLPYQVDVIDDKT-LEIRIAAPDGLLTVEVPRKRLFSVTTYIFIGWMTV 198

Query: 176 ATLLLTAVAILFIRNQVRAIERLAEAADAFGRGED-PEFKPHGAREVRQAALAFIAMKLR 234
           ++++L AVA +F+RNQVR I RLA AADA G+G D P F+  GA EVR+AALAF  M+ R
Sbjct: 199 SSVILFAVATVFMRNQVRPIGRLASAADALGKGRDVPNFRSEGALEVRRAALAFTRMRDR 258

Query: 235 IQRHIEQRTALLASVSHDLRTPLTRLKLEMAMAEPCERMEAMKGDLAEMEHMIDEYLAFA 294
           I R I QRT +LA VSHDLRTPLTR++L++A+ E  E    +  D+AEME M++ YLAFA
Sbjct: 259 INRQIAQRTEMLAGVSHDLRTPLTRMRLQLALMEGEEGTVELTEDIAEMERMVEGYLAFA 318

Query: 295 RGEGGEAIQVVDLSDLVESVVADAERGGAAIETEITQGLETRLRPLTFRRALANLIDNGV 354
           RGEG E      ++DLV+ VV    R GA I+    Q L   L+P    R LAN+I N  
Sbjct: 319 RGEGTEETVATCITDLVDEVVGRMRRNGARIDLHTEQPLTVPLKPNAMERCLANIIGNAH 378

Query: 355 AHADRVRVTVSPRQTGGVDVAVDDDGPGIPEDKYEEAFKPFSRLDESRNQNEKGVGLGLA 414
                + V V  R  G V+V VDDDGPGIP ++ E+ F+ F R++ SRN    G GLGL 
Sbjct: 379 RFGQHIAVRVGVRD-GHVEVVVDDDGPGIPPERREDVFRAFFRIESSRNPRTGGTGLGLT 437

Query: 415 IARDMARGLGGDLVLSRSALGGLRALIRLP 444
           IARD+ R +GGD+ L  S  GGLRA IRLP
Sbjct: 438 IARDVVRAMGGDIFLENSPFGGLRARIRLP 467