Pairwise Alignments

Query, 233 a.a., two-component response regulator petR from Caulobacter crescentus NA1000

Subject, 244 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  182 bits (463), Expect = 4e-51
 Identities = 104/232 (44%), Positives = 137/232 (59%), Gaps = 12/232 (5%)

Query: 11  LLVVDDDDRLRKLIKEFLSRAGFRVTAASSAAAADKLFDALDFDLMVLDVMMPGEDGMAF 70
           +L+VDDD RLR+L++ FL   G+RV    +    D+L     F L+VLD+MMPGEDG++ 
Sbjct: 13  ILIVDDDARLRRLLERFLDEQGYRVRTVENTEQMDRLLSRELFQLVVLDLMMPGEDGLSA 72

Query: 71  TKRLRAKGGEAGRTPILMLTARDQTADRIEGLSSGVDDYLGKPFEPQELLLRIEAILRRS 130
            +RLR    +    PI+MLTA+   A RI+GL  G DDYL KPF P+ELL RI A+LRR 
Sbjct: 73  CRRLREGNNQ---IPIIMLTAKGDEASRIQGLEQGADDYLAKPFNPRELLARIRAVLRRQ 129

Query: 131 AARPVGPKA-----LSLGRCTFDADRGELTCDGEAVRITEAEVTLLRRLARSLHEPVDR- 184
           A +  G  A     ++ G         EL    E   +T  E  +L+ L +   EP+ R 
Sbjct: 130 APQVPGAPASEDETVTFGEYELSLATRELKKGNEVHMLTTGEFAVLKALVQHAREPLTRD 189

Query: 185 --LELARDTA-DATGRAVDVQVTRLRRKIEPDPKNPRYLQTVRGVGYRLAPD 233
             + LAR    DA  R++DVQ++RLRR IEPDP  PRY+QTV GVGY   PD
Sbjct: 190 KLMNLARGREWDALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPD 241