Pairwise Alignments

Query, 394 a.a., PiuB-family transmembrane transporter from Caulobacter crescentus NA1000

Subject, 570 a.a., PepSY-associated TM helix domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 84/380 (22%), Positives = 147/380 (38%), Gaps = 30/380 (7%)

Query: 33  MKARTLRAWSWVHKWSSLVSTAFLLMLCITGLPLVFSHEIEHVLMEEAWTPARPDGPKLN 92
           MK    R+ +W+H W+ L     LL++   G    F HEI      E       D  +  
Sbjct: 1   MKETFFRSMTWMHTWAGLAVCWLLLLIFFAGSLSYFRHEISLWSKPELHKSVFQDYDQQR 60

Query: 93  LDQVLDTALARKPGEVPAYMSF-----DEDRPVVN---VTSVQPGGKAGVYSFQPIDQTS 144
           + Q +    A    + P   S+      E +P ++       + G + G +    + Q  
Sbjct: 61  IGQQIAKGQAYLADKAPDAASWTISFPSERKPYLSFGWADEPKKGERRGKFHEHVVSQDG 120

Query: 145 GDPAPPVAGHPVMEFLLQLHTDMFL--GLAGMLFLGAMGLLLIVALVSGVVLYAPFMRRL 202
                 +       F  +LH D+     +A    +G   + +++AL+SGVV++    +  
Sbjct: 121 QQMITEIRDSRGGNFFYRLHFDLHYLPVVAARWIVGLATMAMLIALISGVVIHKRIFK-- 178

Query: 203 PFGTVRASKRARTRWLDYHNLLGAVTAAWVLVVGATGVVNALATPIVGYWKNTALKEL-- 260
            F + R +K +R+ WLD HN+   +   + L++  TG++    T +  +    AL+E   
Sbjct: 179 DFFSFRPAKGSRS-WLDAHNVSAVMALPYHLIITYTGLI----TLMFMFMPWGALQEYDG 233

Query: 261 -TAAYDSPVAPG----QRSSLQAAVDKAKQALPDKDLQFVAFPGSDYS-----TDHHYAV 310
              A+ + + P     + S   A + +A   LP  + Q+ A P    S      D+    
Sbjct: 234 DVRAFRADLNPARIQTKPSKDAAPLIEAASLLPQIEQQWGAAPLKQVSISAPGKDNSRIS 293

Query: 311 FFHGKTPLTTHLTTPALIDARTGELAAIA-PTPWYVKTLTLSQPLHFGDYGGMGLKILWA 369
           F        T      + D   GEL + A P     KT      LH   +    L+  + 
Sbjct: 294 FALNSEQTVTDRRNLLIFDGVKGELISKADPDSATYKTYDTLMALHTARFADWALRGFFF 353

Query: 370 LLDIATIVILASGLYLWLAK 389
           L  +    ++A+G  LW  K
Sbjct: 354 LCGLLGCAMVATGTLLWAVK 373