Pairwise Alignments

Query, 394 a.a., PiuB-family transmembrane transporter from Caulobacter crescentus NA1000

Subject, 539 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 90/384 (23%), Positives = 148/384 (38%), Gaps = 31/384 (8%)

Query: 33  MKART--LRAWSWVHKWSSLVSTAFLLMLCITGLPLVFSHEIEHVLMEEAWTPARPDGPK 90
           MK R+  LR +  +H W+ +++   L +    G   +F   I+   M  A T   P  P 
Sbjct: 1   MKVRSDVLRVYQSIHIWTGIIAGIVLFIGFYAGSLTMFKGAIDAWSMPPAMT--LPQVPA 58

Query: 91  LNLDQVLDTALARKPGEVPAYMSFDEDRPVVNVTSVQPGGKAGVYSFQPIDQTSGDPAPP 150
             LD ++   LA+       +     D     +T  Q G +  +     +   S D    
Sbjct: 59  EKLDDLVSQVLAQDDKAKIGFSLHLNDEHQSPMTWYQQGSERELSMSHQLWHASLDENGL 118

Query: 151 V-----AGHPVMEFLLQLHTDMFLG------LAGMLFLGAMGLLLIVALVSGVVLYAPFM 199
           +         + E + QLH    +        AG+  LG   +L  +ALVSGV+   P +
Sbjct: 119 LLRQLSTSSELAELIDQLHRTAGIAGEVGHDQAGVYVLGIAAVLYFLALVSGVIFLLPTL 178

Query: 200 RRLPFGTVRASKRARTRWLDYHNLLGAVTAAWVLVVGATGVVNALATPIVGYWKNTALKE 259
            +  F  +R  K     WLD HNL+G  +  + LV+  T +V A    +    K+    E
Sbjct: 179 TK-SFFALRKDKGESRFWLDAHNLVGITSLPFHLVICVTVIVFAFHDQLYDGLKHMVYGE 237

Query: 260 -----LTAAYDSPVAPGQRSSLQAAVDKAKQALPDKDLQFVAFPGSDYSTD------HHY 308
                 +A   +P        +   + K +Q  PD  +  + F   D          ++ 
Sbjct: 238 KPLFAQSAPDRTPYTLADLPKITTVLAKVQQIAPDYQVNEMTFMNLDNPRATLRLGLYNP 297

Query: 309 AVFFHGKTPLTTHL-TTPALIDARTGELAAIAPTPWYVKTLTLSQPLHFGDYGGMGLKIL 367
             F  G  P+T  L   P  +      +       W  +T+ +   LHFG YGG   + +
Sbjct: 298 NGFMRG--PVTDFLYLHPYSLKVSNSTIDQSEQGIW-ARTVAVFFGLHFGSYGGDLGRWV 354

Query: 368 WALLDIATIVILASGLYLWLAKRK 391
           +  L ++   +  SG  LWL KR+
Sbjct: 355 YFFLGLSGAFLFYSGNLLWLEKRR 378