Pairwise Alignments

Query, 394 a.a., PiuB-family transmembrane transporter from Caulobacter crescentus NA1000

Subject, 546 a.a., membrane protein from Herbaspirillum seropedicae SmR1

 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 99/388 (25%), Positives = 169/388 (43%), Gaps = 37/388 (9%)

Query: 33  MKARTLRAWSWVHKWSSLVSTAFLLMLCITGLPLVFSHEIEHVLMEEAWTPARPDGPK-L 91
           MK    ++ +W+H WS L+    LL++   G    F  EI   +M E     R   P+ L
Sbjct: 1   MKEGLRQSMAWLHTWSGLLVCWLLLLVFAGGSASYFKDEISFWMMPELHATQRQPVPQPL 60

Query: 92  NLDQVLDTALARKPGEVPAYMSFDEDRPV-VNVTSVQPGGKAGV-------YSFQPIDQT 143
            +++ +     + P     ++S    R V + V  + P  K G        ++ + +D T
Sbjct: 61  AVERAIAHLQQQAPQAERWFISLPSARSVAMRVGWIAPPPKDGPAGSARSRFTSELVDVT 120

Query: 144 SGDPAPPVAGHPVMEFLLQLHTDM-FLGLAGMLFLGAMG-LLLIVALVSGVVLYAPFMRR 201
           +G     V      EFL +LH D+ ++ +    ++ ++G L ++VA+VSGV+ +    + 
Sbjct: 121 TGQKMAAVRETRGGEFLYRLHFDLHYMPVQWARWIVSIGALFMLVAIVSGVITHKRIFK- 179

Query: 202 LPFGTVRASKRARTRWLDYHNLLGAVTAAWVLVVGATGVVNALATPIVGYWKNTAL--KE 259
             F T RA+K  R+ WLD HN    +   + L++  TG+V  L   I+ +   TA   K 
Sbjct: 180 -DFFTFRANKGQRS-WLDAHNAAAVLALPFHLMITYTGLV-TLMFMIMPWGVQTAYPGKG 236

Query: 260 LTAAYDSPVAP---------GQRSSLQA---AVDKAKQALPDKDLQFVAF--PGSDYSTD 305
             +A+   V P         GQ + L A    V +A+Q      L  V    PG   +T 
Sbjct: 237 GESAFFEEVFPNVAGRGKAAGQAAPLTAIGPLVTQAQQHWQGAPLALVTINHPGDAKAT- 295

Query: 306 HHYAVFFHGKTPLTTHLTTPALIDARTG-ELAAIAPTPWYV-KTLTLSQPLHFGDYGGMG 363
               V    K    ++L    + D  +G + A++   P     T  +   LH G +    
Sbjct: 296 ---VVLTRQKAATLSYLQPALVFDGVSGVQKASVGEQPSNTGVTRAVLYGLHLGHFADPW 352

Query: 364 LKILWALLDIATIVILASGLYLWLAKRK 391
           L+ L+ L  ++  +++ASG  LW  K +
Sbjct: 353 LRWLFFLCGLSGYLMVASGALLWAVKTR 380