Pairwise Alignments

Query, 342 a.a., membrane permease from Caulobacter crescentus NA1000

Subject, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 76/340 (22%), Positives = 156/340 (45%), Gaps = 42/340 (12%)

Query: 23  SAVLWPFTLALVLAILITSLSDRVVRL-LPKARPWMVFAITAVIVGGIIVASMAVVIGGG 81
           S ++ PF L+  +A++   +   ++R  +PK    M+     V++G  +   +   I   
Sbjct: 32  SPIVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVMLGLWLATLVGSSINEF 91

Query: 82  AR---------------IVERMPAMMARIDQLLALIHLPGGGVMSLAALAQKVELGPLAD 126
           ++               I+E++  +  RI +   L +   G  +S+              
Sbjct: 92  SKQLPHYRDQLIQQFGWILEKLQTLNIRISKEQVLAYFDPGMALSMTT------------ 139

Query: 127 GLLTSVQNASAGLGLTLIFLFFLLLSKPMIEKRIDQIVASRGGQGLAMVLERSFSGVERY 186
            +L+ V N  A L L ++ + F+L     + K++   +A    +     +++    V +Y
Sbjct: 140 NMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKVH--LALDDPEMRLQQIDKFLHSVNQY 197

Query: 187 MYVQSITGLMIAFGSWVVMRAVGLESALFWSLVIFLFAYLPVLGVLAGSVGPTLFALLQF 246
           M ++++  L       + + A+G++ AL W+++ FLF Y+P +G +  ++   L A +Q 
Sbjct: 198 MVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLFNYIPNIGSIIAAIPAILLAFIQ- 256

Query: 247 PTLTPAIA-----IFVGIQVVSSIVGNLVLPKMQADSQNIDPAASLIAVGMWTVLWGVPG 301
             L PA A     +++G  +V   +GN++ PK       +      +++  W  L G  G
Sbjct: 257 --LGPAAAGGTALLYLGTNMV---MGNVIEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVG 311

Query: 302 AFLAIPLTLALMYALAQYDDLRWLAVLISHDGDPTPMEPA 341
             L++PLT+ +  AL +    RWLA+L++ D D + ++PA
Sbjct: 312 MLLSVPLTMIVKIALERSSSGRWLAILLADDVD-SELKPA 350