Pairwise Alignments

Query, 186 a.a., RNA polymerase ECF-type sigma factor from Caulobacter crescentus NA1000

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Dechlorosoma suillum PS

 Score = 75.9 bits (185), Expect = 4e-19
 Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 9   DDALLAGVGRGDPSAVRTLLDRRLPRILALARRMLNDAGEAEDVAQETFLRAWKQARSWK 68
           D  L+     GD  A   L+ +   ++  L  R + D  E EDVAQE F++A++   S++
Sbjct: 7   DQKLVERAQSGDKKAFELLVAKYQRKLGRLLSRFIRDPAEVEDVAQEAFIKAYRALPSFR 66

Query: 69  PGGARFDTWLHRVALNLCYDRL---RRRREVVTDAPPEQ---IDPGP------APDAGLM 116
            G + F TWL+R+ +N   + L    RR    T+   E+    D G        P+  L+
Sbjct: 67  -GDSAFYTWLYRIGINTAKNYLVAQGRRAPTSTEFDSEEAETFDDGEQLRDINTPENLLL 125

Query: 117 QSELSRRVEAALAALPARQREAIVLCHHQGLGNIEAAGLMAISVEALESLLSRGRRALKA 176
             ++   V AA+ ALP   R AI+L   +GL   E A +M   +  + S + R R A+  
Sbjct: 126 SKQIGETVNAAMDALPEELRTAIMLRELEGLSYEEIAKIMDCPIGTIRSRIFRAREAVAT 185

Query: 177 SLADL 181
            L  L
Sbjct: 186 KLRPL 190