Pairwise Alignments

Query, 186 a.a., RNA polymerase ECF-type sigma factor from Caulobacter crescentus NA1000

Subject, 257 a.a., Alternative RNA polymerase sigma factor SigE from Mycobacterium tuberculosis H37Rv

 Score = 99.0 bits (245), Expect = 6e-26
 Identities = 56/157 (35%), Positives = 89/157 (56%), Gaps = 6/157 (3%)

Query: 27  LLDRRLPRILALARRMLNDAGEAEDVAQETFLRAWKQARSWKPGGARFDTWLHRVALNLC 86
           L+ +   R+  LA R+  +  +AED+ QETF+R ++  ++++PG   F+ WLHR+  NL 
Sbjct: 87  LVRQHADRVYRLAYRLSGNQHDAEDLTQETFIRVFRSVQNYQPG--TFEGWLHRITTNLF 144

Query: 87  YDRLRRRREVVTDAPPEQIDPGPA----PDAGLMQSELSRRVEAALAALPARQREAIVLC 142
            D +RRR  +  +A PE  D  PA    P+     + L   ++AALA+LP   R A+VLC
Sbjct: 145 LDMVRRRARIRMEALPEDYDRVPADEPNPEQIYHDARLGPDLQAALASLPPEFRAAVVLC 204

Query: 143 HHQGLGNIEAAGLMAISVEALESLLSRGRRALKASLA 179
             +GL   E    + + +  + S + RGR+AL+  LA
Sbjct: 205 DIEGLSYEEIGATLGVKLGTVRSRIHRGRQALRDYLA 241