Pairwise Alignments

Query, 308 a.a., transposase from Caulobacter crescentus NA1000

Subject, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  307 bits (786), Expect = 2e-88
 Identities = 151/248 (60%), Positives = 184/248 (74%)

Query: 21  SERRACSIVKADRKMVRYRSRRPPDTELRERLRGLAAERRRFGYRRLFVLLRREGELSGK 80
           ++RRAC++   D ++ R RS+R  DTELR R++ LA+ERRRFGYRRL +LL+REG     
Sbjct: 11  NQRRACALAGIDPRVYRRRSKRLADTELRVRMKELASERRRFGYRRLHMLLKREGWEVNW 70

Query: 81  NRIYRLYREEGLTVRKRRARRRAIGTRAPILVEAKANARWSLDFVHDQFAGGRRFRVLNV 140
            ++YRLYR+EGLTVRKR  R+RA+GTR P+ +    N RWSLDF+ D    GRRFRVLNV
Sbjct: 71  KKLYRLYRDEGLTVRKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNV 130

Query: 141 VDDVTRECLAAIPDTSISGRRVARELSALIARRGRPGMIVSDNGTEFTSTAILAWAEDHR 200
           +DD +RECLAA+ DTSISG RVAREL  +   RG P ++VSDNGTE TS A+L W ED +
Sbjct: 131 IDDFSRECLAAVVDTSISGARVARELDRIAELRGYPCLVVSDNGTELTSNAMLKWQEDRK 190

Query: 201 VAWHYIAPGKPTQNGFVESFNGRMRDELLNETLFFGLDHARQKLAAWAEDYNTRRPHSSI 260
           V WHYIAPGKP QNG VESFNGRMR+E LNE LF  L HA + +AAW +DYN  RPHSS+
Sbjct: 191 VDWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDDYNHHRPHSSL 250

Query: 261 GYQTPAAY 268
              TP  Y
Sbjct: 251 DGLTPREY 258