Pairwise Alignments

Query, 484 a.a., cobyric acid synthase CobQ from Caulobacter crescentus NA1000

Subject, 541 a.a., cobyric acid synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  383 bits (983), Expect = e-110
 Identities = 229/506 (45%), Positives = 302/506 (59%), Gaps = 32/506 (6%)

Query: 4   LMIQGCGSDVGKSVLVAGLCRLFANRGFAVRPFKPQNMSNNAAVTAEGGEIGRAQALQAI 63
           LM+QG  SD GKS LVAG+CRL A  G  V PFKPQNM+ N+AVT +GGEIGRAQALQA 
Sbjct: 35  LMVQGTTSDAGKSTLVAGICRLLAREGVKVAPFKPQNMALNSAVTIDGGEIGRAQALQAA 94

Query: 64  ACRTPPTVEMNPVLLKPQSDIGAQVVVRGRMAGSWAASGY-----QDHKASLLPIVVESF 118
           AC   P  + NP+LLKP SD GAQ++V G+   +  AS +     +D+KA  L  V+ESF
Sbjct: 95  ACFLAPHTDFNPILLKPSSDTGAQIIVHGKALTTLEASAFFGEKSKDYKAMALNAVLESF 154

Query: 119 RALERQSDLVIVEGAGSPAEINLRAGDIANMGFARAADVPVVLVGDIDRGHVIAALVGAH 178
             L +Q   ++VEGAGSPAEINLR GDIANMGFA A D PV+++ DID+G V A LVG  
Sbjct: 155 ARLGQQYQTIVVEGAGSPAEINLREGDIANMGFAEAVDCPVIIIADIDKGGVFAHLVGTL 214

Query: 179 AVLDPEDRAMIKGFLINKFRGDPALFDDGRRAIVERTGWADLGMAPWLAAARRLPAEDAV 238
           A+L P ++A +KGF+IN+FRGD +L   G   +   T    LG+ P+L     L AEDA+
Sbjct: 215 ALLSPSEQARVKGFVINRFRGDISLLQSGLDWLEAHTQKPVLGVLPYLHDL-HLDAEDAL 273

Query: 239 VLDARSAGRDGRIRIVVPMLSRIANFDEFDALRAEPGVAFAFVPPGSALPGD-----ADV 293
           + ++ +     R ++ V +  R +N  +FD LR  P + F +V   +          AD+
Sbjct: 274 I-ESPTKQAQSRFKVRVLVYPRTSNHTDFDPLRLHPDIDFDYVSLQTQASAQTQEIVADL 332

Query: 294 VILPGTKATRADLDFVRAQGWDIDLQAHLRRSGRVLGICGGYQMLGRRVADPDGVEGAPG 353
           +ILPG+K  RADL F+R QGWD  +  HLR  G++LGICGGYQMLG  +ADP G+E   G
Sbjct: 333 LILPGSKNVRADLAFLREQGWDKQIAKHLRYGGKLLGICGGYQMLGESIADPMGIEDTLG 392

Query: 354 TSEGLGLLDVETVMTGDKTLRPVTGRLP-GGARFE--GYEMHVGR-----TSGAARPMLT 405
            S+GLG L + T    +K LR VTG L   G + E  GYE+H G      +S AA+    
Sbjct: 393 VSQGLGYLPITTEFKAEKQLRRVTGHLALQGQQVEVKGYEIHCGESQYLTSSDAAKSAPL 452

Query: 406 FDTGET-----------DGAVSADGRVSGCYVHGLFDRGEARAALLAELGVA-SDAADQA 453
               E+           DG +S DG+V G Y+HGLFD  EA   +L   G+  + A D  
Sbjct: 453 RLKSESACDQQAEKPFADGCLSDDGQVLGSYLHGLFDSPEACQLVLHWAGLENAQAIDIN 512

Query: 454 VRVDLALDEIAAALESAFDIRSLARL 479
              +  LD +A  L    D++ LA +
Sbjct: 513 DIREQQLDRLADVLAEHLDMQKLASI 538