Pairwise Alignments

Query, 462 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Caulobacter crescentus NA1000

Subject, 477 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase from Sinorhizobium meliloti 1021

 Score =  312 bits (799), Expect = 2e-89
 Identities = 190/462 (41%), Positives = 262/462 (56%), Gaps = 15/462 (3%)

Query: 5   LWTADEIAEAVGGQVAGDF--AVSGVSIDTRTVEPGDLFVPLVGVR-DGHDFVPQAVANG 61
           LWT+ ++  A+ G+  G+    ++G+SID+RT+  G+ F  + G R DGHD+   A+ANG
Sbjct: 4   LWTSSDLLAAMNGRPVGNLPEGITGISIDSRTIGDGEAFFAIRGDRVDGHDYAGIALANG 63

Query: 62  AAGVLAARA-------VDAPAVMVADTFKALEALGVAARERAPQCKRGAVTGSVGKTSVT 114
           AA ++ + A       + AP ++V D  +A+  LG  AR+R+   K  AVTGSVGKT+  
Sbjct: 64  AALLVVSEAKLPALGRLIAPMIVVDDVLEAMIRLGCVARDRSA-AKIIAVTGSVGKTTTK 122

Query: 115 RAIEAGLRLAGKAHASVKSYNNHIGVPLTLARMPRDTERAVFEVGMNHAGEIVPLSGFVR 174
             +   L   G+ HASV S+NNH GVPLTLARMP  T+  VFE+GMNHAGEI+PL+  VR
Sbjct: 123 EMLRHVLSPLGRVHASVASFNNHWGVPLTLARMPETTDFGVFEIGMNHAGEILPLTRMVR 182

Query: 175 PHAVAITTVGPVHIENFSDGEAGVARAKAEILAGLQPGGIAVLNADNHWFDFLKGEAEKV 234
           PH   +T++   H+ NF+  +  +A AKAEI  G+  GG AV+N D+  +D L+  A   
Sbjct: 183 PHVAVVTSIAAAHLGNFTSLDE-IAAAKAEIFEGVVNGGHAVINRDSAQYDLLERAAAAA 241

Query: 235 GAT-VWSFGEAAGATARLTGFQVEGAGATVSVDLRGEALTFPIHQTGVHWGPNSLCVLLM 293
           G + V SFG    +  RL  F     G+ +   + G  L   I   G H   N+L  +  
Sbjct: 242 GVSHVHSFGANPRSEFRLAEFAGGAEGSVLWAGIGGRTLEIAIGAPGRHIAENALAAIAA 301

Query: 294 LEALDVPRETALAALAAFAPIEGRGAEKTIRIPGGAFTLVDESYNANPVSMQAALKTLGA 353
                   +   A+ A   P +GRG    +RI  G  T++DESYNANP SM+AA+  L  
Sbjct: 302 ATLAGADTDRVAASFATMQPEKGRGLRHRLRIGTGHLTVIDESYNANPASMRAAISLLRD 361

Query: 354 RKVA--GRRVVALTDMLELGEGSAQFHAELAEPIAAANVDAVFLAGVHMKSLWEALPPTR 411
            + A  GRR+  L DMLE+GE SA  HA LA P+  A +  V+LAG  M  L +ALPP  
Sbjct: 362 AEPAPGGRRIAVLGDMLEMGEHSAAVHAALAGPVVEAGIADVWLAGPEMAHLRDALPPEV 421

Query: 412 RGGYAEVAEKLTSVLAGAVQPGDVVMVKGSNGSKAGVLAAAL 453
              + +V   LT+   GAV  GDVVMVK S G+    +  AL
Sbjct: 422 SVVHRDVVGDLTAYALGAVSAGDVVMVKSSKGTGCAKIVQAL 463