Pairwise Alignments

Query, 462 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Caulobacter crescentus NA1000

Subject, 470 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase MurF from Phaeobacter inhibens DSM 17395

 Score =  350 bits (899), Expect = e-101
 Identities = 211/468 (45%), Positives = 270/468 (57%), Gaps = 13/468 (2%)

Query: 4   ALWTADEIAEAVGGQVAGDFAVSGVSIDTRTVEPGDLFVPLVGVRDGHDFVPQAVANGAA 63
           +LWTA+E A A GGQ  GD+ V G+SIDTR++  GDLFV L   RDGHDFV QA+  GA 
Sbjct: 2   SLWTAEEAAAATGGQAVGDWRVDGISIDTRSIAAGDLFVALKAARDGHDFVAQALEKGAG 61

Query: 64  GVLAARAV-----DAPAVMVADTFKALEALGVAARERAPQCKRGAVTGSVGKTSVTRAIE 118
             L +R       DAP ++V D   ALEALG A R R    +  AVTGSVGKTS    + 
Sbjct: 62  AALVSRRPEGVGDDAPLLLVDDVQTALEALGRAGRART-DARVIAVTGSVGKTSTKEMLA 120

Query: 119 AGLRLAGKAHASVKSYNNHIGVPLTLARMPRDTERAVFEVGMNHAGEIVPLSGFVRPHAV 178
             L   G+ HA+V SYNNH GVPLTLARMPRDTE AV E+GMNH GEI PL+   RPH  
Sbjct: 121 RMLSDQGRTHAAVASYNNHWGVPLTLARMPRDTEFAVIEIGMNHPGEISPLAKQARPHVA 180

Query: 179 AITTVGPVHIENFSDGEAGVARAKAEILAGLQPGGIAVLNADNHWFDFLKGEAEKVGATV 238
            +TTV PVH+E F DG  G+A  KA I+ GL+PGG+AVLNAD      L+  AE+V   V
Sbjct: 181 MVTTVAPVHLEAF-DGIEGIAAEKAAIIDGLEPGGVAVLNADIAEAPILQSVAERVTHDV 239

Query: 239 WSFGEAAG---ATARLTGFQVEGAGATVSVDL-RGEALTFPIHQTGVHWGPNSLCVLLML 294
             FG   G    T  LT   + G      V L   +     I   G H+  N+L  L  L
Sbjct: 240 QWFGTGTGPIAPTYHLTATTLRGDETLALVTLPNAQTHRLHIQSLGAHFAMNALGALACL 299

Query: 295 EALDVPRETALAALAAFAPIEGRGAEKTIRIPG--GAFTLVDESYNANPVSMQAALKTLG 352
            ALD+    A+ +L+ ++P+ GRGA +T+ +    G   L+D+SYNANP S+ AAL  L 
Sbjct: 300 AALDLDLAKAVQSLSLWSPVTGRGARETVSLGAGQGEILLLDDSYNANPTSVAAALAVLA 359

Query: 353 ARKVAGRRVVALTDMLELGEGSAQFHAELAEPIAAANVDAVFLAGVHMKSLWEALPPTRR 412
           A   AGRR+  L DM ELG    + H++LA+  A   +D +   G  M +L  ALP  +R
Sbjct: 360 ATPCAGRRIAYLGDMKELGPQEQRLHSDLADLDAVQALDEIHCIGPLMGALHAALPAEKR 419

Query: 413 GGYAEVAEKLTSVLAGAVQPGDVVMVKGSNGSKAGVLAAALAALDLGE 460
           GG+   ++ + + LAG +  GDVV+ KGS       +   +  L  GE
Sbjct: 420 GGHYATSDDVRADLAGQIAAGDVVLAKGSLSMALAKVVDGIRELGHGE 467