Pairwise Alignments

Query, 462 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Caulobacter crescentus NA1000

Subject, 469 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dechlorosoma suillum PS

 Score =  167 bits (422), Expect = 9e-46
 Identities = 148/473 (31%), Positives = 220/473 (46%), Gaps = 47/473 (9%)

Query: 10  EIAEAVGGQVAGDFAV-SGVSIDTRTVEPGDLFVPLVGVR-DGHDFVPQAVANGAAGVLA 67
           E+A A  G   G   +  GVS D+R+V  G+LFV L G R DGH+++ QA   GA   + 
Sbjct: 6   EVARATNGTAYGSNVLFGGVSTDSRSVGRGELFVALRGERFDGHEYLAQAGERGACAAVV 65

Query: 68  A--------RAVDAPAVMVADTFKALEALGVAARERAPQCKRGAVTGSVGKTSV------ 113
           A          V  P V VADT  AL AL    R +       AVTGS GKTS       
Sbjct: 66  AVDTVEQLQGKVSLPLVAVADTRLALGALAGYWRAKF-SLPLIAVTGSNGKTSTKEMIAS 124

Query: 114 ---TRAIEAGLRLAGKAHASVKSYNNHIGVPLTLARMPRDTERAVFEVGMNHAGEIVPLS 170
               +A+  G   A    A+  ++NN IG+PLTL ++       V E+GMNH GEI  L+
Sbjct: 125 ILQAQAVLDGYDPAMVVLATQGNFNNDIGLPLTLLKLRTTHRSGVIEMGMNHPGEIGYLT 184

Query: 171 GFVRPHAVAITTVGPVHIENFSDGEAGVARAKAEILAGLQPGGIAVLNADNHWFDFLKGE 230
              +P    +T     H+E   D +  VA  KA I AGL+PGG+A+++AD+ +  + KG 
Sbjct: 185 RLAQPTVALVTNAQRAHLEGMGDLQQ-VAEEKATIYAGLKPGGVALVSADDAFAAYWKGV 243

Query: 231 AEKVGATVWSFGEAAGATARLTGFQVEGAGATVSVDL---RGEALTFPIHQTGVHWGPNS 287
            E+     +   + A       G +V+  G    +DL   +G A    +   G+H   N+
Sbjct: 244 NERRRVVTFGLDKPAD-----VGGKVQLHGLETRIDLTSPKGNA-AIRLRVPGLHNARNA 297

Query: 288 LCVLLMLEALDVPRETALAALAAFAPIEGRGAEKTIRIPGGAFTLVDESYNANPVSMQAA 347
           +       A  +     +  L +F  ++GR  ++  +   GA  ++D++YNANP S++A 
Sbjct: 298 VAAAAAALAGGISLAAVVGGLESFRGVKGRLQQR--QAAAGA-VILDDTYNANPDSVRAG 354

Query: 348 LKTLGARKVAGRRVVALTDMLELGEGSAQFHAELAEPIAAANVDAVFLAGVHMKSLWEAL 407
           +  L A    GR+++ L DM E+G  S Q+H E+     +  VD +   G       EA 
Sbjct: 355 IDVLAA--TVGRKILVLGDMGEIGAMSGQYHDEIGGYAKSQGVDQLHCLG-------EAA 405

Query: 408 PPTRR-----GGYAEVAEKLTSVLAGAVQPGDVVMVKGSNGSKAGVLAAALAA 455
               R     G + +  E L   +   +     V+VKGS   K   +  AL A
Sbjct: 406 AQAARNFGAGGHHYKNLEALVQAVQAELTGDTTVLVKGSRFMKMERVVDALTA 458