Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Caulobacter crescentus NA1000

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (507), Expect = 1e-55
 Identities = 160/462 (34%), Positives = 228/462 (49%), Gaps = 54/462 (11%)

Query: 14  VFGLGRTGLTAARALIAGGAKVALWDEK--PASREAAAAEGFAVVDLQAADWS-----QF 66
           V GLG TGL+  R L   G    + D +  P   +  +AE F  V L    +      Q 
Sbjct: 13  VLGLGATGLSVVRFLARKGIVPLVMDSRRQPPGMDVLSAE-FPDVTLVTGGFDCRYLVQA 71

Query: 67  AALMLSPGVPLSHPKPHWTVEKARAAGVEVLGDVELFARTVNAAPAHKRPKIIAITGTNG 126
            ++++SPG+ +  P+    V  A   G+EV+GDVELFAR +        P ++AITG+NG
Sbjct: 72  QSIIISPGIAVDTPE----VRAAMDMGIEVIGDVELFAREIQ----DMAPCVLAITGSNG 123

Query: 127 KSTTTALIGHLCASAGRDTRVGGNIGLGVLGLEDMHGGAVYVLELSSYQLDLTSSLKPDA 186
           KST T L+G +  +  +   VGGNIG+  L L    G  ++VLELSS+QL+ T SL   A
Sbjct: 124 KSTVTTLVGEMARADNKAVAVGGNIGVPALELLGK-GAELFVLELSSFQLETTHSLHCIA 182

Query: 187 VVLLNISPDHLDRHGGMDGYIAAKRRIFLNQGKGDTAIIGVDDAWCQQICTEITAANRRT 246
              LNIS DH+DR+  ++ Y  AK R++    +   ++   DDA        I    R T
Sbjct: 183 GTCLNISEDHMDRYTDLEAYRQAKLRLY---PQSKLSVYNRDDA------ATIPDEPRNT 233

Query: 247 IWPISAGKAMGRGVYALQ------GVLYDATGERVVEVADILRARSLPGRHNWQNAAAAY 300
           +       + G GV  L       G +Y    E ++ + D+    +L G HN  N  AA 
Sbjct: 234 V-------SFGLGVPELDDWGLMDGKIYHGASE-IMNLLDV----ALIGSHNHANLLAAM 281

Query: 301 AAARAIGISMQDAVDGLMTFPGLAHRMETVGKIGKVRFVNDSKATNADAARQAMSSYPK- 359
           A   A GIS +  V     F GLAHR E V     + +VNDSKATN  A   A++   + 
Sbjct: 282 ALCEAAGISREAMVKVAKEFTGLAHRCELVASHNSIAWVNDSKATNVGATVAALNGLAEH 341

Query: 360 ---FYWIAGGVAKAGGIDDLKDLFPRIAKAYLIGEAAEPFSWTLAGKAECVLSGTLEKAV 416
                 IAGG  K    + L+     ++    +G   +  +    G    +   T+ +AV
Sbjct: 342 LGDIILIAGGDGKGADFEPLRGALGAVSHLITLGRDGDKIAVLKEG---AIKVATMAEAV 398

Query: 417 QQAYADAAASGEEAIVLLSPACASFDQFSDFEARGEAFRAAV 458
           ++A A  A  G+  IVLLSPACAS D +++F ARG+ FRA V
Sbjct: 399 EKAKA-LANPGD--IVLLSPACASLDMYTNFMARGDDFRANV 437