Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Caulobacter crescentus NA1000

Subject, 465 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD from Phaeobacter inhibens DSM 17395

 Score =  367 bits (941), Expect = e-106
 Identities = 212/466 (45%), Positives = 290/466 (62%), Gaps = 14/466 (3%)

Query: 1   MIPVRGFEDKTVAVFGLGRTGLTAARALIAGGAKVALWDEKPASREAAAAEGFAVVDLQA 60
           MIPV GFE   VAV GLGR+G   ARAL  GGA+   WD+ P +R  A  EGF   DLQ 
Sbjct: 1   MIPVTGFEGAKVAVLGLGRSGFATARALREGGAEPVCWDDNPGARARAEVEGFVCRDLQK 60

Query: 61  AD-WSQFAALMLSPGVPLSHPKPHWTVEKARAAGVEVLGDVELFARTVNAAPAHK---RP 116
           A  +   A+L++SPG+P  +PKP+  +  A  AGV V  D+ LF R+V      +    P
Sbjct: 61  AGAFDDIASLVVSPGIPHLYPKPNPVIHAALVAGVPVDNDIGLFFRSVATRGWERFDQAP 120

Query: 117 KIIAITGTNGKSTTTALIGHLCASAGRDTRVGGNIGLGVLGLEDMHGGAVYVLELSSYQL 176
           +I+A+TG+NGKSTT AL+ H+   AGR++++ GNIG GVL ++    G + VLELSSYQ 
Sbjct: 121 RIVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGSGGIVVLELSSYQT 180

Query: 177 DLTSSLKPDAVVLLNISPDHLDRHGGMDGYIAAKRRIFLNQGKGDTAIIGVDDAWCQQIC 236
           DL  +L PD  V  N+SPDHLDRH GM GY AAKRR+F  +G  D AIIGVD+     + 
Sbjct: 181 DLARALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLFA-EGGPDRAIIGVDEDEGLYLA 239

Query: 237 TEIT-AANRRTIWPISAGK---AMGRGVYALQGVLYDATGERVVEVADILRARSLPGRHN 292
            +++ AA+   +  ISA +    +G  V+A +G L +    R     D+ + + LPG HN
Sbjct: 240 GQLSEAASDDRVIRISASQKLTGLGWQVFARKGFLSEYRKGRQAASIDLRQMQGLPGAHN 299

Query: 293 WQNAAAAYAAARAIGISMQDAVDGLMTFPGLAHRMETVGKIGKVRFVNDSKATNADAARQ 352
            QNA AAYAAARA+G++ +   D L ++PGL HR +T+     VR+VNDSKATN D+A +
Sbjct: 300 HQNACAAYAAARALGLAPRLIEDALASYPGLPHRSQTIATHAGVRYVNDSKATNLDSAVK 359

Query: 353 AMSSYPKFYWIAGGVAKAGGIDDLKDLFPRIAKAYLIGEAAEPFSWTLAGKAECVLSGTL 412
           A+S++    WI GG+ K GG++ L+    ++ KAY+IG  A  F+  L  +AE  +  T+
Sbjct: 360 ALSAFDNIRWICGGLEKDGGLEALRGQTGKVRKAYVIGREAAGFAMQLDVEAEVCI--TM 417

Query: 413 EKAVQQAYADAAASGEEAIVLLSPACASFDQFSDFEARGEAFRAAV 458
            +AV +A A+A        VLL+PA ASFDQ+ +FE RGE F A V
Sbjct: 418 AEAVARASAEAETGD---TVLLAPAAASFDQYDNFEQRGEDFIAEV 460