Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Caulobacter crescentus NA1000

Subject, 445 a.a., UDP-N-acetylmuramoylalanine/D-glutamate ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  176 bits (447), Expect = 1e-48
 Identities = 151/472 (31%), Positives = 224/472 (47%), Gaps = 66/472 (13%)

Query: 12  VAVFGLGRTGLTAARALIAGGAKVALWDEK----PASREAAAAEG---FAVVDLQAADWS 64
           V V G GR+G+ AAR L   GA+V L +      PA     AAE     A  D     + 
Sbjct: 17  VVVVGAGRSGMAAARLLHRMGARVRLLERNADGVPADFVRWAAEAGVEIATGDHAPTQFE 76

Query: 65  QFAALMLSPGVPLSHPKPHWTVEKARAAGVEVLGDVELFARTVNAAPAHKRPKIIAITGT 124
              A++ SPG+ +S  +P   +        E++ ++EL  R ++  P      ++A+TGT
Sbjct: 77  GARAVVPSPGMAVSKLRP---LLAQGPDAPEIMAEMELAWRQLDGEP------VLAVTGT 127

Query: 125 NGKSTTTALIGHLCASAGRDTRVGGNIG--LGVLGLEDMHGGA-------VYVLELSSYQ 175
           +GK+TT +L   +  + G    +GGNIG  L    L   HGGA       V V+E+SS+Q
Sbjct: 128 SGKTTTVSLCAAMLRAQGLSVFLGGNIGTPLSEYVLSVAHGGADGQGRADVLVIEISSFQ 187

Query: 176 LDLTSSLKPDAVVLLNISPDHLDRHGGMDGYIAAKRRIFLNQGKGDTAIIGVDDAWCQQI 235
           L   ++ +P   +LLNIS +HLD H  M  YI AK R+F    +GD AI G       Q 
Sbjct: 188 LQACTTFRPRVAMLLNISENHLDYHADMAEYIDAKFRLFRCMEEGDLAIFG-------QG 240

Query: 236 CTEITAANRRTIWPISAGKAMGRGVYALQGVLYDATGERVVEVADILRARSLPGRHNWQN 295
             ++ AA  R + P              + + +DA   R            L G HN  N
Sbjct: 241 VRDLVAA--RDLKP--------------RTLFFDAAARRFPRTC-------LLGGHNQAN 277

Query: 296 AAAAYAAARAIGISMQDAVDGLMTFPGLAHRMETVGKIGKVRFVNDSKATNADAARQAMS 355
             AA+ A R  G++ + A   +  F  + HR+E V +   V +VNDSK T  +A R A+ 
Sbjct: 278 IEAAWQACREFGVTPEAAEKAVADFAPMEHRLEAVAERNGVLWVNDSKCTTVEALRVALQ 337

Query: 356 SYPK-FYWIAGGVAKAGGIDDLKDLFP----RIAKAYLIGEAAEPFSWTLAGKAECVLSG 410
           ++ +    + GG  K G   DL  L P    R+      G + E F     G+ +  +S 
Sbjct: 338 AFDRPVVLMVGGKFKGG---DLASLLPLLCGRVRAVVGFGASREHFEGAWMGQGDFPMS- 393

Query: 411 TLEKAVQQAYADAAASGEEA-IVLLSPACASFDQFSDFEARGEAFRAAVNGL 461
               A++ A A+AAA       V+++PA +SFD F++++ RG AFR AV  L
Sbjct: 394 -WHPALEPAVAEAAALARPGDAVVMAPATSSFDLFANYKERGHAFRRAVEAL 444